dataimport/massive_store.py
author Julien Cristau <julien.cristau@logilab.fr>
Mon, 09 Nov 2015 15:22:43 +0100
changeset 10869 575982c948a9
parent 10867 ca73ee6d24ad
child 10870 9dedf464596b
permissions -rw-r--r--
[dataimport] remove drop_index parameter from massive store "drop_index=False" also implied not dropping any constraints, in particular foreign keys, which meant any attempt to import entities would fail, because we only add metadata (the entities table) after the entity's insertion.
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# coding: utf-8
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# copyright 2015 LOGILAB S.A. (Paris, FRANCE), all rights reserved.
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# contact http://www.logilab.fr/ -- mailto:contact@logilab.fr
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#
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# This file is part of CubicWeb.
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#
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# CubicWeb is free software: you can redistribute it and/or modify it under the
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# terms of the GNU Lesser General Public License as published by the Free
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# Software Foundation, either version 2.1 of the License, or (at your option)
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# any later version.
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#
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# CubicWeb is distributed in the hope that it will be useful, but WITHOUT ANY
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# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
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# A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
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# details.
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#
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# You should have received a copy of the GNU Lesser General Public License along
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# with CubicWeb.  If not, see <http://www.gnu.org/licenses/>.
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import logging
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from datetime import datetime
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from collections import defaultdict
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from io import StringIO
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from six.moves import range
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from yams.constraints import SizeConstraint
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from psycopg2 import ProgrammingError
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from cubicweb.dataimport import stores, pgstore
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from cubicweb.utils import make_uid
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from cubicweb.server.sqlutils import SQL_PREFIX
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class MassiveObjectStore(stores.RQLObjectStore):
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    """
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    Store for massive import of data, with delayed insertion of meta data.
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    WARNINGS:
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   - This store may be only used with PostgreSQL for now, as it relies
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     on the COPY FROM method, and on specific PostgreSQL tables to get all
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     the indexes.
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   - This store can only insert relations that are not inlined (i.e.,
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     which do *not* have inlined=True in their definition in the schema).
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   It should be used as follows:
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       store = MassiveObjectStore(cnx)
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       store.init_rtype_table('Person', 'lives_in', 'Location')
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       ...
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       store.create_entity('Person', subj_iid_attribute=person_iid, ...)
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       store.create_entity('Location', obj_iid_attribute=location_iid, ...)
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       ...
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       # subj_iid_attribute and obj_iid_attribute are argument names
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       # chosen by the user (e.g. "cwuri"). These names can be identical.
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       # person_iid and location_iid are unique IDs and depend on the data
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       # (e.g URI).
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       store.flush()
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       store.relate_by_iid(person_iid, 'lives_in', location_iid)
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       # For example:
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       store.create_entity('Person',
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                           cwuri='http://dbpedia.org/toto',
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                           name='Toto')
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       store.create_entity('Location',
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                           uri='http://geonames.org/11111',
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                           name='Somewhere')
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       store.flush()
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       store.relate_by_iid('http://dbpedia.org/toto',
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                       'lives_in',
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                       'http://geonames.org/11111')
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       # Finally
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       store.flush_meta_data()
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       store.convert_relations('Person', 'lives_in', 'Location',
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                               'subj_iid_attribute', 'obj_iid_attribute')
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       # For the previous example:
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       store.convert_relations('Person', 'lives_in', 'Location', 'cwuri', 'uri')
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       ...
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       store.cleanup()
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    """
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    def __init__(self, cnx, autoflush_metadata=True,
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                 replace_sep='', commit_at_flush=True,
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                 pg_schema='public',
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                 iid_maxsize=1024, uri_param_name='rdf:about',
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                 eids_seq_range=10000, eids_seq_start=None,
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                 on_commit_callback=None, on_rollback_callback=None,
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                 slave_mode=False,
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                 source=None):
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        """ Create a MassiveObject store, with the following attributes:
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        - cnx: CubicWeb cnx
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        - autoflush_metadata: Boolean.
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                              Automatically flush the metadata after
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                              each flush()
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        - replace_sep: String. Replace separator used for
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                       (COPY FROM) buffer creation.
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        - commit_at_flush: Boolean. Commit after each flush().
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        - eids_seq_range: Int. Range of the eids_seq_range to be fetched each time
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                               by the store (default is 10000).
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                               If None, the sequence eids is attached to each entity tables
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                               (backward compatibility with the 0.2.0).
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        - eids_seq_start: Int. Set the eids sequence value (if None, nothing is done).
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        - iid_maxsize: Int. Max size of the iid, used to create the
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                    iid_eid convertion table.
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        - uri_param_name: String. If given, will use this parameter to get cw_uri
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                          for entities.
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        """
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        super(MassiveObjectStore, self).__init__(cnx)
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        self.logger = logging.getLogger('dataio.relationmixin')
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        self._cnx = cnx
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        self.sql = cnx.system_sql
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        self.iid_maxsize = iid_maxsize
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        self.replace_sep = replace_sep
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        self.commit_at_flush = commit_at_flush
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        self._data_uri_relations = defaultdict(list)
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        self._initialized = {'init_uri_eid': set(),
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                             'uri_eid_inserted': set(),
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                             'uri_rtypes': set(),
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                             'entities': set(),
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                             'rtypes': set(),
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                            }
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        self.sql = self._cnx.system_sql
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        self.logger = logging.getLogger('dataio.massiveimport')
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        self.autoflush_metadata = autoflush_metadata
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        self.replace_sep = replace_sep
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        self.slave_mode = slave_mode
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        self.size_constraints = get_size_constraints(cnx.vreg.schema)
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        self.default_values = get_default_values(cnx.vreg.schema)
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        self._dbh = PGHelper(self._cnx, pg_schema or 'public')
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        self._data_entities = defaultdict(list)
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        self._data_relations = defaultdict(list)
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        self._now = datetime.now()
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        self._default_cwuri = make_uid('_auto_generated')
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        self.uri_param_name = uri_param_name
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        self._count_cwuri = 0
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        self.commit_at_flush = commit_at_flush
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        self.on_commit_callback = on_commit_callback
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        self.on_rollback_callback = on_rollback_callback
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        # Initialized the meta tables of dataio for warm restart
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        self._init_dataio_metatables()
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        # Internal markers of initialization
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   146
        self._eids_seq_range = eids_seq_range
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   147
        self._eids_seq_start = eids_seq_start
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        if self._eids_seq_start is not None:
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   149
            self._cnx.system_sql(self._cnx.repo.system_source.dbhelper.sql_restart_numrange(
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                'entities_id_seq', initial_value=self._eids_seq_start + 1))
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            cnx.commit()
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cd91f46fa633 [dataimport] use next builtin instead of next method on iterators
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        self.get_next_eid = lambda g=self._get_eid_gen(): next(g)
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        # recreate then when self.finish() is called
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575982c948a9 [dataimport] remove drop_index parameter from massive store
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   154
        if not self.slave_mode:
10853
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            self._drop_metatables_constraints()
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   156
        if source is None:
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            source = cnx.repo.system_source
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   158
        self.source = source
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   159
        self._etype_eid_idx = dict(cnx.execute('Any XN,X WHERE X is CWEType, X name XN'))
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   160
        cnx.read_security = False
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   161
        cnx.write_security = False
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   162
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    ### INIT FUNCTIONS ########################################################
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    def init_rtype_table(self, etype_from, rtype, etype_to):
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        """ Build temporary table a for standard rtype """
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        # Create an uri_eid table for each etype for a better
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        # control of which etype is concerns for a particular
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        # possibly multivalued relation.
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        for etype in (etype_from, etype_to):
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   171
            if etype and etype not in self._initialized['init_uri_eid']:
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   172
                self._init_uri_eid_table(etype)
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   173
        if rtype not in self._initialized['uri_rtypes']:
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   174
            # Create the temporary tables
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   175
            if not self._cnx.repo.schema.rschema(rtype).inlined:
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   176
                try:
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   177
                    sql = 'CREATE TABLE %(r)s_relation_iid_tmp (uri_from character ' \
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                          'varying(%(s)s), uri_to character varying(%(s)s))'
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   179
                    self.sql(sql % {'r': rtype, 's': self.iid_maxsize})
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   180
                except ProgrammingError:
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   181
                    # XXX Already exist (probably due to multiple import)
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                    pass
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   183
            else:
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   184
                self.logger.warning("inlined relation %s: cannot insert it", rtype)
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   185
            #Add it to the initialized set
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   186
            self._initialized['uri_rtypes'].add(rtype)
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   187
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   188
    def _init_uri_eid_table(self, etype):
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   189
        """ Build a temporary table for id/eid convertion
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   190
        """
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   191
        try:
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   192
            sql = "CREATE TABLE uri_eid_%(e)s (uri character varying(%(size)s), eid integer)"
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   193
            self.sql(sql % {'e': etype.lower(), 'size': self.iid_maxsize,})
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diff changeset
   194
        except ProgrammingError:
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diff changeset
   195
            # XXX Already exist (probably due to multiple import)
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   196
            pass
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   197
        # Add it to the initialized set
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   198
        self._initialized['init_uri_eid'].add(etype)
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   199
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   200
    def _init_dataio_metatables(self):
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   201
        """ Initialized the meta tables of dataio for warm restart
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   202
        """
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   203
        # Check if dataio tables are not already created (i.e. a restart)
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   204
        self._initialized_table_created = self._dbh.table_exists('dataio_initialized')
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   205
        self._constraint_table_created = self._dbh.table_exists('dataio_constraints')
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   206
        self._metadata_table_created = self._dbh.table_exists('dataio_metadata')
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diff changeset
   207
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    ### RELATE FUNCTION #######################################################
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   209
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   210
    def relate_by_iid(self, iid_from, rtype, iid_to):
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   211
        """Add new relation based on the internal id (iid)
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   212
        of the entities (not the eid)"""
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   213
        # Push data
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   214
        if isinstance(iid_from, unicode):
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   215
            iid_from = iid_from.encode('utf-8')
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diff changeset
   216
        if isinstance(iid_to, unicode):
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   217
            iid_to = iid_to.encode('utf-8')
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   218
        self._data_uri_relations[rtype].append({'uri_from': iid_from, 'uri_to': iid_to})
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parents:
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   219
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   220
    ### FLUSH FUNCTIONS #######################################################
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   221
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   222
    def flush_relations(self):
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   223
        """ Flush the relations data
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   224
        """
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   225
        for rtype, data in self._data_uri_relations.items():
10853
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   226
            if not data:
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   227
                self.logger.info('No data for rtype %s', rtype)
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   228
            buf = StringIO('\n'.join(['%(uri_from)s\t%(uri_to)s' % d for d in data]))
de741492538d [dataimport] backport massive store from dataio cube
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   229
            if not buf:
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                self.logger.info('Empty Buffer for rtype %s', rtype)
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                continue
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            cursor = self._cnx.cnxset.cu
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   233
            if not self._cnx.repo.schema.rschema(rtype).inlined:
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   234
                cursor.copy_from(buf, '%s_relation_iid_tmp' % rtype.lower(),
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   235
                                 null='NULL', columns=('uri_from', 'uri_to'))
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            else:
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                self.logger.warning("inlined relation %s: cannot insert it", rtype)
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            buf.close()
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   239
            # Clear data cache
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   240
            self._data_uri_relations[rtype] = []
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            # Commit if asked
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   242
            if self.commit_at_flush:
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   243
                self.commit()
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   244
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    def fill_uri_eid_table(self, etype, uri_label):
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        """ Fill the uri_eid table
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        """
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        self.logger.info('Fill uri_eid for etype %s', etype)
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        sql = 'INSERT INTO uri_eid_%(e)s SELECT cw_%(l)s, cw_eid FROM cw_%(e)s'
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   250
        self.sql(sql % {'l': uri_label, 'e': etype.lower()})
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        # Add indexes
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        self.sql('CREATE INDEX uri_eid_%(e)s_idx ON uri_eid_%(e)s' '(uri)' % {'e': etype.lower()})
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        # Set the etype as converted
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   254
        self._initialized['uri_eid_inserted'].add(etype)
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   255
        self.commit()
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parents:
diff changeset
   256
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   257
    def convert_relations(self, etype_from, rtype, etype_to,
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   258
                          uri_label_from='cwuri', uri_label_to='cwuri'):
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   259
        """ Flush the converted relations
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        """
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   261
        # Always flush relations to be sure
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   262
        self.logger.info('Convert relations %s %s %s', etype_from, rtype, etype_to)
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parents:
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   263
        self.flush_relations()
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diff changeset
   264
        if uri_label_from and etype_from not in self._initialized['uri_eid_inserted']:
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parents:
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   265
            self.fill_uri_eid_table(etype_from, uri_label_from)
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parents:
diff changeset
   266
        if uri_label_to and etype_to not in self._initialized['uri_eid_inserted']:
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parents:
diff changeset
   267
            self.fill_uri_eid_table(etype_to, uri_label_to)
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parents:
diff changeset
   268
        if self._cnx.repo.schema.rschema(rtype).inlined:
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parents:
diff changeset
   269
            self.logger.warning("Can't insert inlined relation %s", rtype)
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   270
            return
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   271
        if uri_label_from and uri_label_to:
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parents:
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   272
            sql = '''INSERT INTO %(r)s_relation (eid_from, eid_to) SELECT DISTINCT O1.eid, O2.eid
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   273
            FROM %(r)s_relation_iid_tmp AS T, uri_eid_%(ef)s as O1, uri_eid_%(et)s as O2
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diff changeset
   274
            WHERE O1.uri=T.uri_from AND O2.uri=T.uri_to AND NOT EXISTS (
de741492538d [dataimport] backport massive store from dataio cube
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   275
            SELECT 1 FROM %(r)s_relation AS TT WHERE TT.eid_from=O1.eid AND TT.eid_to=O2.eid);
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   276
            '''
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   277
        elif uri_label_to:
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diff changeset
   278
            sql = '''INSERT INTO %(r)s_relation (eid_from, eid_to) SELECT DISTINCT
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diff changeset
   279
            CAST(T.uri_from AS INTEGER), O1.eid
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parents:
diff changeset
   280
            FROM %(r)s_relation_iid_tmp AS T, uri_eid_%(et)s as O1
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diff changeset
   281
            WHERE O1.uri=T.uri_to AND NOT EXISTS (
de741492538d [dataimport] backport massive store from dataio cube
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   282
            SELECT 1 FROM %(r)s_relation AS TT WHERE
de741492538d [dataimport] backport massive store from dataio cube
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   283
            TT.eid_from=CAST(T.uri_from AS INTEGER) AND TT.eid_to=O1.eid);
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   284
            '''
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diff changeset
   285
        elif uri_label_from:
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parents:
diff changeset
   286
            sql = '''INSERT INTO %(r)s_relation (eid_from, eid_to) SELECT DISTINCT O1.eid, T.uri_to
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   287
            O1.eid, CAST(T.uri_to AS INTEGER)
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parents:
diff changeset
   288
            FROM %(r)s_relation_iid_tmp AS T, uri_eid_%(ef)s as O1
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parents:
diff changeset
   289
            WHERE O1.uri=T.uri_from AND NOT EXISTS (
de741492538d [dataimport] backport massive store from dataio cube
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diff changeset
   290
            SELECT 1 FROM %(r)s_relation AS TT WHERE
de741492538d [dataimport] backport massive store from dataio cube
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diff changeset
   291
            TT.eid_from=O1.eid AND TT.eid_to=CAST(T.uri_to AS INTEGER));
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diff changeset
   292
            '''
de741492538d [dataimport] backport massive store from dataio cube
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   293
        try:
de741492538d [dataimport] backport massive store from dataio cube
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diff changeset
   294
            self.sql(sql % {'r': rtype.lower(),
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parents:
diff changeset
   295
                            'et': etype_to.lower() if etype_to else u'',
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parents:
diff changeset
   296
                            'ef': etype_from.lower() if etype_from else u''})
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diff changeset
   297
        except Exception as ex:
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parents:
diff changeset
   298
            self.logger.error("Can't insert relation %s: %s", rtype, ex)
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parents:
diff changeset
   299
        self.commit()
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diff changeset
   300
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   301
    ### SQL UTILITIES #########################################################
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diff changeset
   302
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diff changeset
   303
    def drop_and_store_indexes_constraints(self, tablename):
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   304
        # Drop indexes and constraints
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parents:
diff changeset
   305
        if not self._constraint_table_created:
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parents:
diff changeset
   306
            # Create a table to save the constraints
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parents:
diff changeset
   307
            # Allow reload even after crash
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parents:
diff changeset
   308
            sql = "CREATE TABLE dataio_constraints (origtable text, query text, type varchar(256))"
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   309
            self.sql(sql)
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parents:
diff changeset
   310
            self._constraint_table_created = True
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parents:
diff changeset
   311
        self._drop_table_constraints_indexes(tablename)
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parents:
diff changeset
   312
de741492538d [dataimport] backport massive store from dataio cube
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diff changeset
   313
    def _drop_table_constraints_indexes(self, tablename):
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parents:
diff changeset
   314
        """ Drop and store table constraints and indexes """
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parents:
diff changeset
   315
        indexes, constraints = self._dbh.application_indexes_constraints(tablename)
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   316
        for name, query in constraints.items():
10853
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   317
            sql = 'INSERT INTO dataio_constraints VALUES (%(e)s, %(c)s, %(t)s)'
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   318
            self.sql(sql, {'e': tablename, 'c': query, 't': 'constraint'})
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   319
            sql = 'ALTER TABLE %s DROP CONSTRAINT %s CASCADE' % (tablename, name)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   320
            self.sql(sql)
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   321
        for name, query in indexes.items():
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   322
            sql = 'INSERT INTO dataio_constraints VALUES (%(e)s, %(c)s, %(t)s)'
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   323
            self.sql(sql, {'e': tablename, 'c': query, 't': 'index'})
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   324
            sql = 'DROP INDEX %s' % name
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parents:
diff changeset
   325
            self.sql(sql)
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parents:
diff changeset
   326
de741492538d [dataimport] backport massive store from dataio cube
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diff changeset
   327
    def reapply_constraint_index(self, tablename):
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   328
        if not self._dbh.table_exists('dataio_constraints'):
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   329
            self.logger.info('The table dataio_constraints does not exist '
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   330
                             '(keep_index option should be True)')
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   331
            return
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   332
        sql = 'SELECT query FROM dataio_constraints WHERE origtable = %(e)s'
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   333
        crs = self.sql(sql, {'e': tablename})
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   334
        for query, in crs.fetchall():
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   335
            self.sql(query)
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   336
            self.sql('DELETE FROM dataio_constraints WHERE origtable = %(e)s '
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   337
                     'AND query = %(q)s', {'e': tablename, 'q': query})
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   338
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   339
    def _drop_metatables_constraints(self):
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parents:
diff changeset
   340
        """ Drop all the constraints for the meta data"""
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parents:
diff changeset
   341
        for tablename in ('created_by_relation', 'owned_by_relation',
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6205b89c3af6 [massive store] identity_relation should not be considered, is_relation seems missing
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parents: 10859
diff changeset
   342
                          'is_instance_of_relation', 'is_relation',
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diff changeset
   343
                          'entities'):
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parents:
diff changeset
   344
            self.drop_and_store_indexes_constraints(tablename)
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parents:
diff changeset
   345
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   346
    def _create_metatables_constraints(self):
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   347
        """ Create all the constraints for the meta data"""
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   348
        for tablename in ('entities',
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   349
                          'created_by_relation', 'owned_by_relation',
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6205b89c3af6 [massive store] identity_relation should not be considered, is_relation seems missing
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parents: 10859
diff changeset
   350
                          'is_instance_of_relation', 'is_relation'):
10853
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   351
            # Indexes and constraints
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parents: 10867
diff changeset
   352
            self.reapply_constraint_index(tablename)
10853
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parents:
diff changeset
   353
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   354
    def init_relation_table(self, rtype):
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parents:
diff changeset
   355
        """ Get and remove all indexes for performance sake """
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parents:
diff changeset
   356
        # Create temporary table
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parents:
diff changeset
   357
        if not self.slave_mode and rtype not in self._initialized['rtypes']:
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   358
            sql = "CREATE TABLE %s_relation_tmp (eid_from integer, eid_to integer)" % rtype.lower()
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   359
            self.sql(sql)
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575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   360
            # Drop indexes and constraints
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   361
            tablename = '%s_relation' % rtype.lower()
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   362
            self.drop_and_store_indexes_constraints(tablename)
10853
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   363
            # Push the etype in the initialized table for easier restart
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   364
            self.init_create_initialized_table()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   365
            sql = 'INSERT INTO dataio_initialized VALUES (%(e)s, %(t)s)'
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   366
            self.sql(sql, {'e': rtype, 't': 'rtype'})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   367
            # Mark rtype as "initialized" for faster check
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   368
            self._initialized['rtypes'].add(rtype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   369
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   370
    def init_create_initialized_table(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   371
        """ Create the dataio initialized table
de741492538d [dataimport] backport massive store from dataio cube
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parents:
diff changeset
   372
        """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   373
        if not self._initialized_table_created:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   374
            sql = "CREATE TABLE dataio_initialized (retype text, type varchar(128))"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   375
            self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   376
            self._initialized_table_created = True
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   377
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   378
    def init_etype_table(self, etype):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   379
        """ Add eid sequence to a particular etype table and
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   380
        remove all indexes for performance sake """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   381
        if etype not in self._initialized['entities']:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   382
            # Only for non-initialized etype and not slave mode store
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   383
            if not self.slave_mode:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   384
                if self._eids_seq_range is None:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   385
                    # Eids are directly set by the entities_id_seq.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   386
                    # We attach this sequence to all the created etypes.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   387
                    sql = ("ALTER TABLE cw_%s ALTER COLUMN cw_eid "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   388
                           "SET DEFAULT nextval('entities_id_seq')" % etype.lower())
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   389
                    self.sql(sql)
10869
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   390
                # Drop indexes and constraints
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   391
                tablename = 'cw_%s' % etype.lower()
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   392
                self.drop_and_store_indexes_constraints(tablename)
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   393
                # Push the etype in the initialized table for easier restart
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   394
                self.init_create_initialized_table()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   395
                sql = 'INSERT INTO dataio_initialized VALUES (%(e)s, %(t)s)'
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   396
                self.sql(sql, {'e': etype, 't': 'etype'})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   397
            # Mark etype as "initialized" for faster check
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   398
            self._initialized['entities'].add(etype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   399
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   400
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   401
    ### ENTITIES CREATION #####################################################
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   402
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   403
    def _get_eid_gen(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   404
        """ Function getting the next eid. This is done by preselecting
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   405
        a given number of eids from the 'entities_id_seq', and then
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   406
        storing them"""
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   407
        while True:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   408
            last_eid = self._cnx.repo.system_source.create_eid(self._cnx, self._eids_seq_range)
10859
375a8232e61c [dataimport] import range from six.moves
Julien Cristau <julien.cristau@logilab.fr>
parents: 10856
diff changeset
   409
            for eid in range(last_eid - self._eids_seq_range + 1, last_eid + 1):
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   410
                yield eid
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   411
10864
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   412
    def _apply_size_constraints(self, etype, kwargs):
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   413
        """Apply the size constraints for a given etype, attribute and value."""
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   414
        size_constraints = self.size_constraints[etype]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   415
        for attr, value in kwargs.items():
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   416
            if value:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   417
                maxsize = size_constraints.get(attr)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   418
                if maxsize is not None and len(value) > maxsize:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   419
                    kwargs[attr] = value[:maxsize-4] + '...'
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   420
10864
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   421
    def _apply_default_values(self, etype, kwargs):
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   422
        """Apply the default values for a given etype, attribute and value."""
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   423
        default_values = self.default_values[etype]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   424
        missing_keys = set(default_values) - set(kwargs)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   425
        kwargs.update((key, default_values[key]) for key in missing_keys)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   426
10863
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   427
    # store api ################################################################
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   428
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   429
    def prepare_insert_entity(self, etype, **kwargs):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   430
        """Given an entity type, attributes and inlined relations, returns the inserted entity's
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   431
        eid.
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   432
        """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   433
        # Init the table if necessary
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   434
        self.init_etype_table(etype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   435
        # Add meta data if not given
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   436
        if 'modification_date' not in kwargs:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   437
            kwargs['modification_date'] = self._now
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   438
        if 'creation_date' not in kwargs:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   439
            kwargs['creation_date'] = self._now
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   440
        if 'cwuri' not in kwargs:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   441
            if self.uri_param_name and self.uri_param_name in kwargs:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   442
                kwargs['cwuri'] = kwargs[self.uri_param_name]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   443
            else:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   444
                kwargs['cwuri'] = self._default_cwuri + str(self._count_cwuri)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   445
                self._count_cwuri += 1
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   446
        if 'eid' not in kwargs and self._eids_seq_range is not None:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   447
            # If eid is not given and the eids sequence is set,
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   448
            # use the value from the sequence
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   449
            kwargs['eid'] = self.get_next_eid()
10864
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   450
        self._apply_size_constraints(etype, kwargs)
b7f4acf0473b [dataimport] methods that modify in-place shouldn't return value
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10863
diff changeset
   451
        self._apply_default_values(etype, kwargs)
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   452
        self._data_entities[etype].append(kwargs)
10863
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   453
        return kwargs.get('eid')
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   454
10863
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   455
    def prepare_insert_relation(self, eid_from, rtype, eid_to, **kwargs):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   456
        """Insert into the database a  relation ``rtype`` between entities with eids ``eid_from``
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   457
        and ``eid_to``.
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   458
        """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   459
        # Init the table if necessary
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   460
        self.init_relation_table(rtype)
10863
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   461
        self._data_relations[rtype].append({'eid_from': eid_from, 'eid_to': eid_to})
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   462
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   463
    def flush(self):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   464
        """Flush the data"""
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   465
        self.flush_entities()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   466
        self.flush_internal_relations()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   467
        self.flush_relations()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   468
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   469
    def commit(self):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   470
        """Commit the database transaction."""
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   471
        self.on_commit()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   472
        super(MassiveObjectStore, self).commit()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   473
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   474
    def finish(self):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   475
        """Remove temporary tables and columns."""
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   476
        self.logger.info("Start cleaning")
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   477
        if self.slave_mode:
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   478
            raise RuntimeError('Store cleanup is not allowed in slave mode')
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   479
        self.logger.info("Start cleaning")
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   480
        # Cleanup relations tables
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   481
        for etype in self._initialized['init_uri_eid']:
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   482
            self.sql('DROP TABLE uri_eid_%s' % etype.lower())
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   483
        # Remove relations tables
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   484
        for rtype in self._initialized['uri_rtypes']:
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   485
            if not self._cnx.repo.schema.rschema(rtype).inlined:
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   486
                self.sql('DROP TABLE %(r)s_relation_iid_tmp' % {'r': rtype})
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   487
            else:
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   488
                self.logger.warning("inlined relation %s: no cleanup to be done for it" % rtype)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   489
        self.commit()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   490
        # Get all the initialized etypes/rtypes
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   491
        if self._dbh.table_exists('dataio_initialized'):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   492
            crs = self.sql('SELECT retype, type FROM dataio_initialized')
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   493
            for retype, _type in crs.fetchall():
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   494
                self.logger.info('Cleanup for %s' % retype)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   495
                if _type == 'etype':
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   496
                    # Cleanup entities tables - Recreate indexes
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   497
                    self._cleanup_entities(retype)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   498
                elif _type == 'rtype':
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   499
                    # Cleanup relations tables
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   500
                    self._cleanup_relations(retype)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   501
                self.sql('DELETE FROM dataio_initialized WHERE retype = %(e)s',
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   502
                         {'e': retype})
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   503
        # Create meta constraints (entities, is_instance_of, ...)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   504
        self._create_metatables_constraints()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   505
        self.commit()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   506
        # Delete the meta data table
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   507
        for table_name in ('dataio_initialized', 'dataio_constraints', 'dataio_metadata'):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   508
            if self._dbh.table_exists(table_name):
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   509
                self.sql('DROP TABLE %s' % table_name)
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   510
        self.commit()
8e1f6de61300 [dataimport] implement new store API on massive store
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 10861
diff changeset
   511
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   512
    ### FLUSH #################################################################
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   513
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   514
    def on_commit(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   515
        if self.on_commit_callback:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   516
            self.on_commit_callback()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   517
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   518
    def on_rollback(self, exc, etype, data):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   519
        if self.on_rollback_callback:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   520
            self.on_rollback_callback(exc, etype, data)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   521
            self._cnx.rollback()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   522
        else:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   523
            raise exc
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   524
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   525
    def flush_internal_relations(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   526
        """ Flush the relations data
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   527
        """
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   528
        for rtype, data in self._data_relations.items():
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   529
            if not data:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   530
                # There is no data for these etype for this flush round.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   531
                continue
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   532
            buf = pgstore._create_copyfrom_buffer(data, ('eid_from', 'eid_to'),
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   533
                                                  replace_sep=self.replace_sep)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   534
            if not buf:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   535
                # The buffer is empty. This is probably due to error in _create_copyfrom_buffer
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   536
                raise ValueError
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   537
            cursor = self._cnx.cnxset.cu
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   538
            # Push into the tmp table
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   539
            cursor.copy_from(buf, '%s_relation_tmp' % rtype.lower(),
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   540
                             null='NULL', columns=('eid_from', 'eid_to'))
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   541
            # Clear data cache
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   542
            self._data_relations[rtype] = []
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   543
            # Commit if asked
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   544
            if self.commit_at_flush:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   545
                self.commit()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   546
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   547
    def flush_entities(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   548
        """ Flush the entities data
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   549
        """
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   550
        for etype, data in self._data_entities.items():
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   551
            if not data:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   552
                # There is no data for these etype for this flush round.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   553
                continue
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   554
            # XXX It may be interresting to directly infer the columns'
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   555
            # names from the schema instead of using .keys()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   556
            columns = data[0].keys()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   557
            # XXX For now, the _create_copyfrom_buffer does a "row[column]"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   558
            # which can lead to a key error.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   559
            # Thus we should create dictionary with all the keys.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   560
            columns = set()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   561
            for d in data:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   562
                columns.update(d.keys())
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   563
            _data = []
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   564
            _base_data = dict.fromkeys(columns)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   565
            for d in data:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   566
                _d = _base_data.copy()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   567
                _d.update(d)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   568
                _data.append(_d)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   569
            buf = pgstore._create_copyfrom_buffer(_data, columns,
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   570
                                                  replace_sep=self.replace_sep)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   571
            if not buf:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   572
                # The buffer is empty. This is probably due to error in _create_copyfrom_buffer
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   573
                raise ValueError('Error in buffer creation for etype %s' % etype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   574
            columns = ['cw_%s' % attr for attr in columns]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   575
            cursor = self._cnx.cnxset.cu
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   576
            try:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   577
                cursor.copy_from(buf, 'cw_%s' % etype.lower(), null='NULL', columns=columns)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   578
            except Exception as exc:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   579
                self.on_rollback(exc, etype, data)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   580
            # Clear data cache
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   581
            self._data_entities[etype] = []
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   582
        if self.autoflush_metadata:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   583
            self.flush_meta_data()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   584
        # Commit if asked
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   585
        if self.commit_at_flush:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   586
            self.commit()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   587
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   588
    def flush_meta_data(self):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   589
        """ Flush the meta data (entities table, is_instance table, ...)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   590
        """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   591
        if self.slave_mode:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   592
            raise RuntimeError('Flushing meta data is not allow in slave mode')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   593
        if not self._dbh.table_exists('dataio_initialized'):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   594
            self.logger.info('No information available for initialized etypes/rtypes')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   595
            return
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   596
        if not self._metadata_table_created:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   597
            # Keep the correctly flush meta data in database
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   598
            sql = "CREATE TABLE dataio_metadata (etype text)"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   599
            self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   600
            self._metadata_table_created = True
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   601
        crs = self.sql('SELECT etype FROM dataio_metadata')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   602
        already_flushed = set(e for e, in crs.fetchall())
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   603
        crs = self.sql('SELECT retype FROM dataio_initialized WHERE type = %(t)s',
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   604
                       {'t': 'etype'})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   605
        all_etypes = set(e for e, in crs.fetchall())
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   606
        for etype in all_etypes:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   607
            if etype not in already_flushed:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   608
                # Deals with meta data
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   609
                self.logger.info('Flushing meta data for %s' % etype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   610
                self.insert_massive_meta_data(etype)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   611
                sql = 'INSERT INTO dataio_metadata VALUES (%(e)s)'
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   612
                self.sql(sql, {'e': etype})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   613
        # Final commit
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   614
        self.commit()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   615
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   616
    def _cleanup_entities(self, etype):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   617
        """ Cleanup etype table """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   618
        if self._eids_seq_range is None:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   619
            # Remove DEFAULT eids sequence if added
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   620
            sql = 'ALTER TABLE cw_%s ALTER COLUMN cw_eid DROP DEFAULT;' % etype.lower()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   621
            self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   622
        # Create indexes and constraints
10869
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   623
        tablename = SQL_PREFIX + etype.lower()
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   624
        self.reapply_constraint_index(tablename)
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   625
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   626
    def _cleanup_relations(self, rtype):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   627
        """ Cleanup rtype table """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   628
        # Push into relation table while removing duplicate
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   629
        sql = '''INSERT INTO %(r)s_relation (eid_from, eid_to) SELECT DISTINCT
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   630
                 T.eid_from, T.eid_to FROM %(r)s_relation_tmp AS T
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   631
                 WHERE NOT EXISTS (SELECT 1 FROM %(r)s_relation AS TT WHERE
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   632
                 TT.eid_from=T.eid_from AND TT.eid_to=T.eid_to);''' % {'r': rtype}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   633
        self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   634
        # Drop temporary relation table
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   635
        sql = ('DROP TABLE %(r)s_relation_tmp' % {'r': rtype.lower()})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   636
        self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   637
        # Create indexes and constraints
10869
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   638
        tablename = '%s_relation' % rtype.lower()
575982c948a9 [dataimport] remove drop_index parameter from massive store
Julien Cristau <julien.cristau@logilab.fr>
parents: 10867
diff changeset
   639
        self.reapply_constraint_index(tablename)
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   640
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   641
    def insert_massive_meta_data(self, etype):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   642
        """ Massive insertion of meta data for a given etype, based on SQL statements.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   643
        """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   644
        # Push data - Use coalesce to avoid NULL (and get 0), if there is no
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   645
        # entities of this type in the entities table.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   646
        # Meta data relations
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   647
        self.metagen_push_relation(etype, self._cnx.user.eid, 'created_by_relation')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   648
        self.metagen_push_relation(etype, self._cnx.user.eid, 'owned_by_relation')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   649
        self.metagen_push_relation(etype, self.source.eid, 'cw_source_relation')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   650
        self.metagen_push_relation(etype, self._etype_eid_idx[etype], 'is_relation')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   651
        self.metagen_push_relation(etype, self._etype_eid_idx[etype], 'is_instance_of_relation')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   652
        sql = ("INSERT INTO entities (eid, type, asource, extid) "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   653
               "SELECT cw_eid, '%s', 'system', NULL FROM cw_%s "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   654
               "WHERE NOT EXISTS (SELECT 1 FROM entities WHERE eid=cw_eid)"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   655
               % (etype, etype.lower()))
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   656
        self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   657
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   658
    def metagen_push_relation(self, etype, eid_to, rtype):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   659
        sql = ("INSERT INTO %s (eid_from, eid_to) SELECT cw_eid, %s FROM cw_%s "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   660
               "WHERE NOT EXISTS (SELECT 1 FROM entities WHERE eid=cw_eid)"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   661
               % (rtype, eid_to, etype.lower()))
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   662
        self.sql(sql)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   663
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   664
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   665
### CONSTRAINTS MANAGEMENT FUNCTIONS  ##########################################
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   666
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   667
def get_size_constraints(schema):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   668
    """analyzes yams ``schema`` and returns the list of size constraints.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   669
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   670
    The returned value is a dictionary mapping entity types to a
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   671
    sub-dictionnaries mapping attribute names -> max size.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   672
    """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   673
    size_constraints = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   674
    # iterates on all entity types
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   675
    for eschema in schema.entities():
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   676
        # for each entity type, iterates on attribute definitions
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   677
        size_constraints[eschema.type] = eschema_constraints = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   678
        for rschema, aschema in eschema.attribute_definitions():
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   679
            # for each attribute, if a size constraint is found,
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   680
            # append it to the size constraint list
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   681
            maxsize = None
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   682
            rdef = rschema.rdef(eschema, aschema)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   683
            for constraint in rdef.constraints:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   684
                if isinstance(constraint, SizeConstraint):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   685
                    maxsize = constraint.max
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   686
                    eschema_constraints[rschema.type] = maxsize
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   687
    return size_constraints
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   688
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   689
def get_default_values(schema):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   690
    """analyzes yams ``schema`` and returns the list of default values.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   691
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   692
    The returned value is a dictionary mapping entity types to a
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   693
    sub-dictionnaries mapping attribute names -> default values.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   694
    """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   695
    default_values = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   696
    # iterates on all entity types
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   697
    for eschema in schema.entities():
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   698
        # for each entity type, iterates on attribute definitions
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   699
        default_values[eschema.type] = eschema_constraints = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   700
        for rschema, _ in eschema.attribute_definitions():
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   701
            # for each attribute, if a size constraint is found,
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   702
            # append it to the size constraint list
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   703
            if eschema.default(rschema.type) is not None:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   704
                eschema_constraints[rschema.type] = eschema.default(rschema.type)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   705
    return default_values
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   706
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   707
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   708
class PGHelper(object):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   709
    def __init__(self, cnx, pg_schema='public'):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   710
        self.cnx = cnx
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   711
        # Deals with pg schema, see #3216686
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   712
        self.pg_schema = pg_schema
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   713
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   714
    def application_indexes_constraints(self, tablename):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   715
        """ Get all the indexes/constraints for a given tablename """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   716
        indexes = self.application_indexes(tablename)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   717
        constraints = self.application_constraints(tablename)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   718
        _indexes = {}
10856
b839167d99a4 [dataimport] dict.iteritems() → dict.items()
Julien Cristau <julien.cristau@logilab.fr>
parents: 10855
diff changeset
   719
        for name, query in indexes.items():
10853
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   720
            # Remove pkey indexes (automatically created by constraints)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   721
            # Specific cases of primary key, see #3224079
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   722
            if name not in constraints:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   723
                _indexes[name] = query
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   724
        return _indexes, constraints
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   725
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   726
    def table_exists(self, table_name):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   727
        sql = "SELECT * from information_schema.tables WHERE table_name=%(t)s AND table_schema=%(s)s"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   728
        crs = self.cnx.system_sql(sql, {'t': table_name, 's': self.pg_schema})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   729
        res = crs.fetchall()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   730
        if res:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   731
            return True
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   732
        return False
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   733
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   734
    # def check_if_primary_key_exists_for_table(self, table_name):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   735
    #     sql = ("SELECT constraint_name FROM information_schema.table_constraints "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   736
    #            "WHERE constraint_type = 'PRIMARY KEY' AND table_name=%(t)s AND table_schema=%(s)s")
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   737
    #     crs = self.cnx.system_sql(sql, {'t': table_name, 's': self.pg_schema})
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   738
    #     res = crs.fetchall()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   739
    #     if res:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   740
    #         return True
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   741
    #     return False
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   742
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   743
    def index_query(self, name):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   744
        """Get the request to be used to recreate the index"""
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   745
        return self.cnx.system_sql("SELECT pg_get_indexdef(c.oid) "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   746
                                   "from pg_catalog.pg_class c "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   747
                                   "LEFT JOIN pg_catalog.pg_namespace n "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   748
                                   "ON n.oid = c.relnamespace "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   749
                                   "WHERE c.relname = %(r)s AND n.nspname=%(n)s",
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   750
                                   {'r': name, 'n': self.pg_schema}).fetchone()[0]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   751
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   752
    def constraint_query(self, name):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   753
        """Get the request to be used to recreate the constraint"""
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   754
        return self.cnx.system_sql("SELECT pg_get_constraintdef(c.oid) "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   755
                                   "from pg_catalog.pg_constraint c "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   756
                                   "LEFT JOIN pg_catalog.pg_namespace n "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   757
                                   "ON n.oid = c.connamespace "
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   758
                                   "WHERE c.conname = %(r)s AND n.nspname=%(n)s",
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   759
                                   {'r': name, 'n': self.pg_schema}).fetchone()[0]
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   760
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   761
    def application_indexes(self, tablename):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   762
        """ Iterate over all the indexes """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   763
        # This SQL query (cf http://www.postgresql.org/message-id/432F450F.4080700@squiz.net)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   764
        # aims at getting all the indexes for each table.
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   765
        sql = '''SELECT c.relname as "Name"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   766
        FROM pg_catalog.pg_class c
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   767
        JOIN pg_catalog.pg_index i ON i.indexrelid = c.oid
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   768
        JOIN pg_catalog.pg_class c2 ON i.indrelid = c2.oid
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   769
        LEFT JOIN pg_catalog.pg_user u ON u.usesysid = c.relowner
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   770
        LEFT JOIN pg_catalog.pg_namespace n ON n.oid = c.relnamespace
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   771
        WHERE c.relkind IN ('i','')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   772
        AND c2.relname = '%s'
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   773
        AND n.nspname NOT IN ('pg_catalog', 'pg_toast')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   774
        AND pg_catalog.pg_table_is_visible(c.oid);''' % tablename
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   775
        indexes_list = self.cnx.system_sql(sql).fetchall()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   776
        indexes = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   777
        for name, in indexes_list:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   778
            indexes[name] = self.index_query(name)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   779
        return indexes
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   780
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   781
    def application_constraints(self, tablename):
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   782
        """ Iterate over all the constraints """
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   783
        sql = '''SELECT i.conname as "Name"
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   784
                 FROM pg_catalog.pg_class c JOIN pg_catalog.pg_constraint i
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   785
                 ON i.conrelid = c.oid JOIN pg_catalog.pg_class c2 ON i.conrelid=c2.oid
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   786
                 LEFT JOIN pg_catalog.pg_user u ON u.usesysid = c.relowner
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   787
                 LEFT JOIN pg_catalog.pg_namespace n ON n.oid = c.relnamespace
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   788
                 WHERE c2.relname = '%s' AND n.nspname NOT IN ('pg_catalog', 'pg_toast')
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   789
                 AND pg_catalog.pg_table_is_visible(c.oid);''' % tablename
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   790
        indexes_list = self.cnx.system_sql(sql).fetchall()
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   791
        constraints = {}
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   792
        for name, in indexes_list:
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   793
            query = self.constraint_query(name)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   794
            constraints[name] = 'ALTER TABLE %s ADD CONSTRAINT %s %s' % (tablename, name, query)
de741492538d [dataimport] backport massive store from dataio cube
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
   795
        return constraints