[debian] Set Section: python for python- binary package This is to fix a Lintian warning.

[debian] Install cubicweb-ctl from python2 build Previously, the binary package was empty. Now it is bound to the python2 package as support for python3 is "fresh". In order python2 and python3 packages to be co-installable, we drop the cubicweb-ctl file from both packages.

[debian] Introduce python3-cubicweb and python3-cubicweb-pyramid binary packages This is the bare minimum to have a working cubicweb on python3. Further work is done in default branch.

[skeleton] Update Debian packaging template Here are multiple updates to the Debian packaging template provided when running `cubicweb-ctl newcube`: * Switch to source format 3.0 (quilt). * Switch to debhelper 9. * Switch to dh-python. * Switch to Python 3. * Name the binary package `python3-cubicweb-CUBENAME` instead of just `cubicweb-CUBENAME` (which is still the source package). * Populate Depends using dh_python3 support for Python requirements. * Run test suite at build time using pytest. * Add autopkgtest to run test suite against the installed package. * Bump Standards-Version to 4.3.0.

[test] Use --short-description when testing newcube command

[devtools] Allow to specify short desc on `newcube` command line In order to implement automated testing of `cubicweb-ctl newcube`, we need to avoid any user interaction. So we add a `-s` switch to specify a short description on the command-line instead of requiring an input.

[pkg] Remove build dependency on dh-systemd As suggested by Lintian, remove build dependency on obsolete package dh-systemd. Instead, specify a more precise version of debhelper 9 that added support for systemd.

[config] Raise in case of failure to send emails when in test mode Since, for some reason, exception log messages are not visible when running tests, it's very hard to debug when sendmails() method fails during tests. So, as in some other places, let's raise the exception when in test mode.

[doc] Update documentation to match current Debian packages

[pkg] Remove transitional packages We can take the opportunity of the switch to Python 3 to get rid of old transitional packages. Let's do it. :)

[pkg] Use sections from requires.txt to populate Recommends and Suggests As Denis Laxalde pointed out, dh_python can also generate Recommends and Suggests from Python package names. So let's use that instead of manually populating these fields in `debian/control`. Optional dependencies are currently specified in `setup.py` grouped by feature. These dependency groups are turned into sections in `requires.txt`. Thankfully `dh_python3` has options to populate Recommends or Suggests with all package from a given section. `debian/rules` now contains a list of which sections should go to Recommends and which section should go to Suggests. Because such extra list easily gets out-of-sync, we add a third list for ignored sections, and ensure that all sections currently in `requires.txt` get a mentioned in `debian/rules`. Here are the results compared to the previous version with explicit Recommends and Suggests (only listing Python packages): |==============================================================| | only in previous | common | only in new | |==============================================================| | Recommends | |--------------------------------------------------------------| | | python3-docutils | | | python3-fyzz | | | | python3-imaging | | | | | python3-pycryptodome | | | | python3-pyramid | | | | python3-pyramid-multiauth | | | python3-pysqlite2 | | | | | python3-rdflib | | | | python3-repoze.lru | | | python3-simpletal | | | | | python3-vobject | | | | python3-waitress | | | python3-werkzeug | | | | | python3-wsgicors | | |--------------------------------------------------------------| | Suggests | |--------------------------------------------------------------| | | | python3-pil | We also lose versioned dependencies which should not really be an issue for Recommends and Suggests.

[crypto] Use Cryptodome namespace instead of Crypto PyCryptodome comes in two flavors: “an almost drop-in replacement for the old PyCrypto library” and “a library independent of the old PyCrypto”. The former uses the Crypto namespace, and is shipped as `pycryptodome` while the latter uses Cryptodome instead and lies in the `pycryptodomex` package. Given the reason to switch to PyCryptodome is that PyCrypto in unmaintained, its probably better to avoid any mistake and mandate the specific usage of the Cryptodome namespace by requiring `pycryptodomex` instead of `pycryptodome`. A more present reason is that Debian buster will only provide a package with the separate namespace flavor. The current Recommends is not working with the current code. Although it's important to note that the package name will probably have to be changed to `python3-pycryptodomex` once https://bugs.debian.org/886291 is solved.

[pkg] Remove python3-six from Build-Depends The default branch only provides support for Python 3.

[pkg] Merge python3-cubicweb-pyramid into python3-cubicweb As suggested by Denis Laxalde, we can merge python3-cubicweb-pyramid into python3-cubicweb as all other web backend in the default branch.

[pkg] Remove explicit Depends on Python packages for python3-cubicweb As suggested by Denis Laxalde, we can let pybuild generate the list of Depends from the egg requirements. The list we get is slightly less specific in terms of needed versions, but given the age of the previous ones, it's unlikely to cause issues. Also we lose python3-six from the list… which is correct as it was removed from the dependencies in 26744ad37953.

[pkg] Fix spelling mistake in doc-base abstract

[pkg] Fix doc-base section As pointed by Lintian, the “Apps” section is only used in menu, not in doc-base. We can just remove it.

[pkg] Use “dependency package” instead of “virtual package” to describe python3-cubicweb-postgresql-support The term “virtual” was too imprecise and is not accepted for empty packages by Lintian anymore.

[pkg] Move lintian-overrides file to debian/source directory Just use the now preferred location.

[pkg] Stop using /etc/bash_completion.d cubicweb-ctl shipped an empty /etc/bash_completion.d as a leftover of shipping a bash completion script. As pointed by Lintian, this directory is not obsolete, so let's get rid of it for good.

[pkg] Tidy substvars usage in control file The documentation package was missing a Built-Using field to record the provenance of the templates. Empty packages or meta packages do not require Depends on a specific Python version, so we can remove the relevant substvars.

[pkg] Specify priority “optional” instead of the obsolete “extra” Quoting Lintian, “Since Debian Policy version 4.0.1, the priority extra has been deprecated.” So let's use “optional” instead.

[pkg] Remove build dependency on dh-systemd As suggested by Lintian, remove build dependency on obsolete package dh-systemd. Instead, specify a more precise version of debhelper 9 that added support for systemd.

[pkg] Run test suite as part of autopkgtest Add support for autopkgtest. The test “unittest” will run the test suite using pytest. As we need PostgreSQL in the test environment and open network connection, the test is marked with `isolation-container` and requires at least LXC to be run, e.g: autopkgtest -s -- lxc -s autopkgtest-sid

[pkg] Switch to Debian source format 3.0 (quilt) This forces us to base the Debian package on the source of the Python package (as produced by running `python3 setup.py sdist`). While it might seem cumbersome, this greatly reduces likelyhood of mismatch between an installation via `pip` and one using the Debian package. `dpkg-source` will also document for us what is currently in the source repository but not in the Python package. Currently the missing file are: PKG-INFO cubicweb/sobjects/test/data/cubicweb_comment/schema.py cubicweb/sobjects/test/data/cubicweb_comment/__init__.py cubicweb/sobjects/test/data/cubicweb_comment/__pkginfo__.py cubicweb/sobjects/test/data/cubicweb_card/schema.py cubicweb/sobjects/test/data/cubicweb_card/entities.py cubicweb/sobjects/test/data/cubicweb_card/__init__.py cubicweb/sobjects/test/data/cubicweb_card/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_comment/schema.py cubicweb/server/test/data-migractions/cubicweb_comment/__init__.py cubicweb/server/test/data-migractions/cubicweb_comment/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_localperms/schema.py cubicweb/server/test/data-migractions/cubicweb_localperms/__init__.py cubicweb/server/test/data-migractions/cubicweb_localperms/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_basket/schema.py cubicweb/server/test/data-migractions/cubicweb_basket/__init__.py cubicweb/server/test/data-migractions/cubicweb_basket/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_comment/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_comment/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_comment/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_localperms/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_localperms/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_localperms/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_basket/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_basket/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_basket/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_tag/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_tag/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_tag/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_card/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_card/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_card/__pkginfo__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_file/schema.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_file/__init__.py cubicweb/server/test/data-migractions/migratedapp/cubicweb_file/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_tag/schema.py cubicweb/server/test/data-migractions/cubicweb_tag/__init__.py cubicweb/server/test/data-migractions/cubicweb_tag/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_card/schema.py cubicweb/server/test/data-migractions/cubicweb_card/__init__.py cubicweb/server/test/data-migractions/cubicweb_card/__pkginfo__.py cubicweb/server/test/data-migractions/cubicweb_file/schema.py cubicweb/server/test/data-migractions/cubicweb_file/__init__.py cubicweb/server/test/data-migractions/cubicweb_file/__pkginfo__.py cubicweb/test/data-rewrite/cubicweb_localperms/schema.py cubicweb/test/data-rewrite/cubicweb_localperms/__init__.py cubicweb/test/data-rewrite/cubicweb_localperms/__pkginfo__.py cubicweb/test/data-rewrite/cubicweb_card/schema.py cubicweb/test/data-rewrite/cubicweb_card/entities.py cubicweb/test/data-rewrite/cubicweb_card/__init__.py cubicweb/test/data-rewrite/cubicweb_card/__pkginfo__.py The current manifest will duplicate several files that are stored as symlinks in the Mercurial repository, hence the long list of ignored files in `extend-diff-ignore`.

[pkg] Switch all Debian packages to Python 3

Fix sorting key for rdefs in schema viewer With changeset 234ca3cbbb46, clicking in the schema of an entity with cubicweb in py3 on "vue en boite" will probably result in an infinite spinner (which implies cw > 3.26) What happened ? This "vue en boite" used to work at least until... hg diff -c a8c1ea390400 cubicweb/schema.py @@ -993,10 +992,6 @@ class CubicWebRelationSchema(PermissionM return False return True - @deprecated('use .rdef(subjtype, objtype).role_cardinality(role)') - def cardinality(self, subjtype, objtype, target): - return self.rdef(subjtype, objtype).role_cardinality(target) - class CubicWebSchema(Schema): """set of entities and relations schema defining the possible data sets But, wait ... If I open a shell on an instance of cw 3.24 something seems off >>> list(schema['CWUniqueTogetherConstraint'].relation_definitions())[0][0].cardinality # <bound method CubicWebRelationSchema.wrapped of <constraint_of [CWUniqueTogetherConstraint,CWEType]>> We have been sorting on a method the whole time ? Is it possible what were the effects ? 1) We cannot sort function can't we ? >>> def adder(i): return lambda x: x+i >>> sorted(map(adder,range(10))) [<function __main__.<lambda>>, <function __main__.<lambda>>, ... Yes we can. 2) what does it means. >>> { adder(1) : 1 } Out[19]: {<function __main__.<lambda>>: 1} In fact the function object as a __hash__ method (which is practical for making memoizers (cache)), and return truly random results (pseudo random). My take on this patch is relations have NEVER been sorted by cardinality. No one never ever noticed. Hence, I propose to not fix a bug that never was reported.

Flake8 cubicweb/web/schemaviewer.py

[py3] changing unicode to str py2 support being dropped, passing the code in full py3 str/bytes syntax

[py3] Use sorted(key=...) instead of sorted(cmp=...)

Merge with 3.26

Added tag 3.26.11, debian/3.26.11-1 for changeset 633ca84bea58

[pkg] Version 3.26.11

Added tag debian/3.26.10-1 for changeset 0ce26fb5ab48

[debian] New upstream release

[debian] Drop override_dh_auto_install about cubicweb-ctl The script should be installed normally as it is a setuptools' entry point.

[debian] Remove test/doc Build-Depends We are not actually running tests during package build. (This was disabled for python2, now it is also for python3.) And having these build-depends makes it hard to rebuild the package.

[fix] parse cube version number without space in them

Install patched yapps for test from an http archive Instead of git which require git to be installed. Also downloading archive is faster than cloning the repository.

[server/test] make test filename uniques To avoid these pytest error when collecting the whole test suite: import file mismatch: imported module 'unittest_utils' has this __file__ attribute: cubicweb/cubicweb/server/test/unittest_utils.py which is not the same as the test file we want to collect: cubicweb/cubicweb/test/unittest_utils.py Move cubicweb/server/test/unittest_security.py to cubicweb/server/test/unittest_security.py and cubicweb/test/unittest_utils.py to cubicweb/test/unittest_server_utils.py

Merge 3.26

[dataimport] Fix case when extid is text in use_extid_as_cwuri() Extid can be bytes or text. This avoid AttributeError: 'str' object has no attribute 'decode'

[doc] fix key used in the hook example The hook's regid is check_no_subsidiary_cycle.

[doc] set_operation has been replaced by add_data See the changelog https://cubicweb.readthedocs.io/en/3.26/changes/changelog/#id14

[doc] check_cycle is a standard function

[doc] fix several typos

[pkg] make cubicweb[crypto] depends on pycryptodome instead of pycrypto pycrypto isn't maintained anymore, the last release 2.6.1 is from 2014. Use the drop-in replacement fork pycryptodome instead. pycryptodome is packaged in debian starting from stretch-backports.

[crypto] Encode unicode strings in _cypherer() pycrypto accept both bytes or string but pycryptodome, which will be introduced in next changeset, doesn't accept this. For backward compatibility, encode unicode strings in _cypherer()

[ldapfeed] FIX: Unique Key violation when synchronizing with LDAPfeed What was happening ================== The bug appears when ldapfeed tries to insert a user while another user exists exists with a different source. Simple use case to reproduce: - create a local user in cubicweb (source=system) - sync with ldap - ldapfeed will stop complaining user already exists. Without next patch the test MUST fail with message: cubicweb/server/sources/native.py:714: UniqueTogetherError The ldapfeed is thus stopped ignoring any further ldap entries. The proposal ============ Prior to this patch, the insertion was trying to create all CWUser with the computed login from eeimporter.extid2eid (method process of DataFeedLDAPAdapter). When a CWUser existed with a different cw_source ("system" for user created with cubicweb for instance), it created a conflict. To avoid collisions, in the extentities_generator method a bypass was added at the insertion layer. Prior to insertion the absence of the computed login is checked on a list of all existing login from a different source. If collision is detected, we skip the ldap record. By short circuiting at the CWUser entity insertion level we also avoid to treat CWGroup and EmailAddress related to this user. Hence ensuring a behaviour that will not break existing instances. (conservative approach: faced with ambiguity better do nothing than guess). An error message is added stating explicitly the conflict.

Skip tests for ldapsource with python >= 3.7 Until someone works on fixing these, this should make our CI green again. I tried to use setupModule() to check for python version, but pre_setup_database() is apparently called even when a SkipTest exception is raised there. So handle this in that method. (grafted from 4d68d20427dee4b6751a0f1f5511fec2a04f4782)

Flake8 crypto module

Make crypto module python3-compatible * Remove usage of unicode() and decode the base64-encoded string in encrypt(); * Encode the string received in decrypt() as (I supposed) it should come from the result of encrypt(). Add tests for this module along the way.

[mod] make ViolatedConstraint actually display useful information Move from: (Pdb++) raise some_exception *** ViolatedConstraint: To: (Pdb++) raise some_exception *** ViolatedConstraint: constraint 'cstr56c2ab4b3154f21d08b067742ce5bd9d' is being violated by the query 'ALTER TABLE cw_Bibliography ADD CONSTRAINT cstr56c2ab4b3154f21d08b067742ce5bd9d CHECK(cw_item_type IN ('journalArticle', 'note', 'book', 'thesis', 'film', 'web page', 'manuscrit', 'tapuscrit'))'. You can run the inverted constraint on the database to list the problematic rows. And save hours of debugging to actually understand what is going on.

Fix flake8 errors/warnings about import in cubicweb/_exceptions.py We either ignore errors in case of name re-exports and drop re-exports from old backwards compatibility. We fix the only occurrence of NoSelectableObject being imported from cubicweb in tests and update the import to use lgc instead.

add comment and # noqa on used import

remove unused import

[autopep8] E305 - Expected 2 blank lines after end of function or class

[autopep8] E303 - Remove extra blank lines

[autopep8] E302 - Add missing 2 blank lines

[autopep8] E301 - Add missing blank line