[book] typos / clarifications in create-instance section
Clarify that cubicweb-ctl upgrade needs to be run whenever cubicweb or a
cube is upgraded. Related to #2632425.
usr/lib/PY_VERSION/*-packages/cubicweb/devtools/
usr/lib/PY_VERSION/*-packages/cubicweb/skeleton/
usr/lib/PY_VERSION/*-packages/cubicweb/test
usr/lib/PY_VERSION/*-packages/cubicweb/entities/test
usr/lib/PY_VERSION/*-packages/cubicweb/ext/test
usr/lib/PY_VERSION/*-packages/cubicweb/server/test
usr/lib/PY_VERSION/*-packages/cubicweb/sobjects/test
usr/lib/PY_VERSION/*-packages/cubicweb/hooks/test
usr/lib/PY_VERSION/*-packages/cubicweb/web/test
usr/lib/PY_VERSION/*-packages/cubicweb/etwist/test