#773448: refactor session and 'no connection' handling, by introducing proper web session. We should now be able to see page even when no anon is configured, and be redirected to the login form as soon as one tries to do a query.
"""Check integrity of a CubicWeb repository. Hum actually only the system database
is checked.
:organization: Logilab
:copyright: 2001-2010 LOGILAB S.A. (Paris, FRANCE), license is LGPL v2.
:contact: http://www.logilab.fr/ -- mailto:contact@logilab.fr
:license: GNU Lesser General Public License, v2.1 - http://www.gnu.org/licenses
"""
from __future__ import with_statement
__docformat__ = "restructuredtext en"
import sys
from datetime import datetime
from logilab.common.shellutils import ProgressBar
from cubicweb.schema import PURE_VIRTUAL_RTYPES
from cubicweb.server.sqlutils import SQL_PREFIX
from cubicweb.server.session import security_enabled
def has_eid(sqlcursor, eid, eids):
"""return true if the eid is a valid eid"""
if eids.has_key(eid):
return eids[eid]
sqlcursor.execute('SELECT type, source FROM entities WHERE eid=%s' % eid)
try:
etype, source = sqlcursor.fetchone()
except:
eids[eid] = False
return False
if source and source != 'system':
# XXX what to do...
eids[eid] = True
return True
sqlcursor.execute('SELECT * FROM %s%s WHERE %seid=%s' % (SQL_PREFIX, etype,
SQL_PREFIX, eid))
result = sqlcursor.fetchall()
if len(result) == 0:
eids[eid] = False
return False
elif len(result) > 1:
msg = ' More than one entity with eid %s exists in source !'
print >> sys.stderr, msg % eid
print >> sys.stderr, ' WARNING : Unable to fix this, do it yourself !'
eids[eid] = True
return True
# XXX move to yams?
def etype_fti_containers(eschema, _done=None):
if _done is None:
_done = set()
_done.add(eschema)
containers = tuple(eschema.fulltext_containers())
if containers:
for rschema, target in containers:
if target == 'object':
targets = rschema.objects(eschema)
else:
targets = rschema.subjects(eschema)
for targeteschema in targets:
if targeteschema in _done:
continue
_done.add(targeteschema)
for container in etype_fti_containers(targeteschema, _done):
yield container
else:
yield eschema
def reindex_entities(schema, session, withpb=True):
"""reindex all entities in the repository"""
# deactivate modification_date hook since we don't want them
# to be updated due to the reindexation
repo = session.repo
cursor = session.pool['system']
if not repo.system_source.dbhelper.has_fti_table(cursor):
print 'no text index table'
dbhelper.init_fti(cursor)
repo.system_source.do_fti = True # ensure full-text indexation is activated
etypes = set()
for eschema in schema.entities():
if eschema.final:
continue
indexable_attrs = tuple(eschema.indexable_attributes()) # generator
if not indexable_attrs:
continue
for container in etype_fti_containers(eschema):
etypes.add(container)
print 'Reindexing entities of type %s' % \
', '.join(sorted(str(e) for e in etypes))
if withpb:
pb = ProgressBar(len(etypes) + 1)
# first monkey patch Entity.check to disable validation
# clear fti table first
session.system_sql('DELETE FROM %s' % session.repo.system_source.dbhelper.fti_table)
if withpb:
pb.update()
# reindex entities by generating rql queries which set all indexable
# attribute to their current value
source = repo.system_source
for eschema in etypes:
for entity in session.execute('Any X WHERE X is %s' % eschema).entities():
source.fti_index_entity(session, entity)
if withpb:
pb.update()
def check_schema(schema, session, eids, fix=1):
"""check serialized schema"""
print 'Checking serialized schema'
unique_constraints = ('SizeConstraint', 'FormatConstraint',
'VocabularyConstraint', 'RQLConstraint',
'RQLVocabularyConstraint')
rql = ('Any COUNT(X),RN,EN,ECTN GROUPBY RN,EN,ECTN ORDERBY 1 '
'WHERE X is CWConstraint, R constrained_by X, '
'R relation_type RT, R from_entity ET, RT name RN, '
'ET name EN, X cstrtype ECT, ECT name ECTN')
for count, rn, en, cstrname in session.execute(rql):
if count == 1:
continue
if cstrname in unique_constraints:
print "ERROR: got %s %r constraints on relation %s.%s" % (
count, cstrname, en, rn)
def check_text_index(schema, session, eids, fix=1):
"""check all entities registered in the text index"""
print 'Checking text index'
cursor = session.system_sql('SELECT uid FROM appears;')
for row in cursor.fetchall():
eid = row[0]
if not has_eid(cursor, eid, eids):
msg = ' Entity with eid %s exists in the text index but in no source'
print >> sys.stderr, msg % eid,
if fix:
session.system_sql('DELETE FROM appears WHERE uid=%s;' % eid)
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
def check_entities(schema, session, eids, fix=1):
"""check all entities registered in the repo system table"""
print 'Checking entities system table'
cursor = session.system_sql('SELECT eid FROM entities;')
for row in cursor.fetchall():
eid = row[0]
if not has_eid(cursor, eid, eids):
msg = ' Entity with eid %s exists in the system table but in no source'
print >> sys.stderr, msg % eid,
if fix:
session.system_sql('DELETE FROM entities WHERE eid=%s;' % eid)
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
print 'Checking entities tables'
for eschema in schema.entities():
if eschema.final:
continue
table = SQL_PREFIX + eschema.type
column = SQL_PREFIX + 'eid'
cursor = session.system_sql('SELECT %s FROM %s;' % (column, table))
for row in cursor.fetchall():
eid = row[0]
# eids is full since we have fetched everyting from the entities table,
# no need to call has_eid
if not eid in eids or not eids[eid]:
msg = ' Entity with eid %s exists in the %s table but not in the system table'
print >> sys.stderr, msg % (eid, eschema.type),
if fix:
session.system_sql('DELETE FROM %s WHERE %s=%s;' % (table, column, eid))
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
def bad_related_msg(rtype, target, eid, fix):
msg = ' A relation %s with %s eid %s exists but no such entity in sources'
print >> sys.stderr, msg % (rtype, target, eid),
if fix:
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
def check_relations(schema, session, eids, fix=1):
"""check all relations registered in the repo system table"""
print 'Checking relations'
for rschema in schema.relations():
if rschema.final or rschema in PURE_VIRTUAL_RTYPES:
continue
if rschema.inlined:
for subjtype in rschema.subjects():
table = SQL_PREFIX + str(subjtype)
column = SQL_PREFIX + str(rschema)
sql = 'SELECT %s FROM %s WHERE %s IS NOT NULL;' % (
column, table, column)
cursor = session.system_sql(sql)
for row in cursor.fetchall():
eid = row[0]
if not has_eid(cursor, eid, eids):
bad_related_msg(rschema, 'object', eid, fix)
if fix:
sql = 'UPDATE %s SET %s=NULL WHERE %s=%s;' % (
table, column, column, eid)
session.system_sql(sql)
continue
cursor = session.system_sql('SELECT eid_from FROM %s_relation;' % rschema)
for row in cursor.fetchall():
eid = row[0]
if not has_eid(cursor, eid, eids):
bad_related_msg(rschema, 'subject', eid, fix)
if fix:
sql = 'DELETE FROM %s_relation WHERE eid_from=%s;' % (
rschema, eid)
session.system_sql(sql)
cursor = session.system_sql('SELECT eid_to FROM %s_relation;' % rschema)
for row in cursor.fetchall():
eid = row[0]
if not has_eid(cursor, eid, eids):
bad_related_msg(rschema, 'object', eid, fix)
if fix:
sql = 'DELETE FROM %s_relation WHERE eid_to=%s;' % (
rschema, eid)
session.system_sql(sql)
def check_metadata(schema, session, eids, fix=1):
"""check entities has required metadata
FIXME: rewrite using RQL queries ?
"""
print 'Checking metadata'
cursor = session.system_sql("SELECT DISTINCT type FROM entities;")
eidcolumn = SQL_PREFIX + 'eid'
for etype, in cursor.fetchall():
table = SQL_PREFIX + etype
for rel, default in ( ('creation_date', datetime.now()),
('modification_date', datetime.now()), ):
column = SQL_PREFIX + rel
cursor = session.system_sql("SELECT %s FROM %s WHERE %s is NULL"
% (eidcolumn, table, column))
for eid, in cursor.fetchall():
msg = ' %s with eid %s has no %s'
print >> sys.stderr, msg % (etype, eid, rel),
if fix:
session.system_sql("UPDATE %s SET %s=%%(v)s WHERE %s=%s ;"
% (table, column, eidcolumn, eid),
{'v': default})
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
cursor = session.system_sql('SELECT MIN(%s) FROM %sCWUser;' % (eidcolumn,
SQL_PREFIX))
default_user_eid = cursor.fetchone()[0]
assert default_user_eid is not None, 'no user defined !'
for rel, default in ( ('owned_by', default_user_eid), ):
cursor = session.system_sql("SELECT eid, type FROM entities "
"WHERE NOT EXISTS "
"(SELECT 1 FROM %s_relation WHERE eid_from=eid);"
% rel)
for eid, etype in cursor.fetchall():
msg = ' %s with eid %s has no %s relation'
print >> sys.stderr, msg % (etype, eid, rel),
if fix:
session.system_sql('INSERT INTO %s_relation VALUES (%s, %s) ;'
% (rel, eid, default))
print >> sys.stderr, ' [FIXED]'
else:
print >> sys.stderr
def check(repo, cnx, checks, reindex, fix, withpb=True):
"""check integrity of instance's repository,
using given user and password to locally connect to the repository
(no running cubicweb server needed)
"""
session = repo._get_session(cnx.sessionid, setpool=True)
# yo, launch checks
if checks:
eids_cache = {}
with security_enabled(session, read=False): # ensure no read security
for check in checks:
check_func = globals()['check_%s' % check]
check_func(repo.schema, session, eids_cache, fix=fix)
if fix:
cnx.commit()
else:
print
if not fix:
print 'WARNING: Diagnostic run, nothing has been corrected'
if reindex:
cnx.rollback()
session.set_pool()
reindex_entities(repo.schema, session, withpb=withpb)
cnx.commit()