[migration] more rename_entity_type fix
* ensure repository caches and system tables are properly cleanup
* delete relations from/to entities deleted through sql
So we don't ends up with a corrupted db...
debian/tmp/usr/lib/PY_VERSION/site-packages/cubicweb/server/ usr/lib/PY_VERSION/site-packages/cubicweb
debian/tmp/usr/lib/PY_VERSION/site-packages/cubicweb/hooks/ usr/lib/PY_VERSION/site-packages/cubicweb
debian/tmp/usr/lib/PY_VERSION/site-packages/cubicweb/sobjects/ usr/lib/PY_VERSION/site-packages/cubicweb
debian/tmp/usr/lib/PY_VERSION/site-packages/cubicweb/schemas/ usr/lib/PY_VERSION/site-packages/cubicweb
debian/tmp/usr/share/cubicweb/migration/ usr/share/cubicweb/