server/sqlutils.py
author Jérôme Roy <jerome.roy@logilab.fr>
Fri, 14 Mar 2014 15:19:31 +0100
branchstable
changeset 9591 5b8bc486d0dc
parent 9364 73bd5012336f
child 9447 0636c4960259
permissions -rw-r--r--
[entity] User-defined relation to skip for copy has precedence Otherwise permission problems can occur on rtypes not yet skipped Closes #3653459
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# copyright 2003-2011 LOGILAB S.A. (Paris, FRANCE), all rights reserved.
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# contact http://www.logilab.fr/ -- mailto:contact@logilab.fr
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#
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# This file is part of CubicWeb.
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#
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# CubicWeb is free software: you can redistribute it and/or modify it under the
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# terms of the GNU Lesser General Public License as published by the Free
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# Software Foundation, either version 2.1 of the License, or (at your option)
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# any later version.
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#
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# CubicWeb is distributed in the hope that it will be useful, but WITHOUT
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# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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# FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
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# details.
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#
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# You should have received a copy of the GNU Lesser General Public License along
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# with CubicWeb.  If not, see <http://www.gnu.org/licenses/>.
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"""SQL utilities functions and classes."""
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__docformat__ = "restructuredtext en"
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import os
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import re
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import subprocess
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from datetime import datetime, date
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from itertools import ifilter
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from logilab import database as db, common as lgc
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from logilab.common.shellutils import ProgressBar
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from logilab.common.date import todate, todatetime, utcdatetime, utctime
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from logilab.database.sqlgen import SQLGenerator
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from cubicweb import Binary, ConfigurationError
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from cubicweb.uilib import remove_html_tags
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from cubicweb.schema import PURE_VIRTUAL_RTYPES
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from cubicweb.server import SQL_CONNECT_HOOKS
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from cubicweb.server.utils import crypt_password
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from rql.utils import RQL_FUNCTIONS_REGISTRY
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lgc.USE_MX_DATETIME = False
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SQL_PREFIX = 'cw_'
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def _run_command(cmd):
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    print ' '.join(cmd)
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    return subprocess.call(cmd)
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def sqlexec(sqlstmts, cursor_or_execute, withpb=not os.environ.get('APYCOT_ROOT'),
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            pbtitle='', delimiter=';', cnx=None):
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    """execute sql statements ignoring DROP/ CREATE GROUP or USER statements
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    error.
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    :sqlstmts_as_string: a string or a list of sql statements.
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    :cursor_or_execute: sql cursor or a callback used to execute statements
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    :cnx: if given, commit/rollback at each statement.
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    :withpb: if True, display a progresse bar
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    :pbtitle: a string displayed as the progress bar title (if `withpb=True`)
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    :delimiter: a string used to split sqlstmts (if it is a string)
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    Return the failed statements (same type as sqlstmts)
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    """
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    if hasattr(cursor_or_execute, 'execute'):
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        execute = cursor_or_execute.execute
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    else:
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        execute = cursor_or_execute
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    sqlstmts_as_string = False
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    if isinstance(sqlstmts, basestring):
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        sqlstmts_as_string = True
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        sqlstmts = sqlstmts.split(delimiter)
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    if withpb:
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        pb = ProgressBar(len(sqlstmts), title=pbtitle)
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    failed = []
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    for sql in sqlstmts:
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        sql = sql.strip()
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        if withpb:
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            pb.update()
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        if not sql:
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            continue
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        try:
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            # some dbapi modules doesn't accept unicode for sql string
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            execute(str(sql))
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        except Exception, err:
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            if cnx:
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                cnx.rollback()
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            failed.append(sql)
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        else:
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            if cnx:
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                cnx.commit()
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    if withpb:
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        print
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    if sqlstmts_as_string:
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        failed = delimiter.join(failed)
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    return failed
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def sqlgrants(schema, driver, user,
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              text_index=True, set_owner=True,
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              skip_relations=(), skip_entities=()):
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    """return sql to give all access privileges to the given user on the system
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    schema
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    """
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    from yams.schema2sql import grant_schema
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    from cubicweb.server.sources import native
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    output = []
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    w = output.append
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    w(native.grant_schema(user, set_owner))
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    w('')
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    if text_index:
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        dbhelper = db.get_db_helper(driver)
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        w(dbhelper.sql_grant_user_on_fti(user))
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        w('')
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    w(grant_schema(schema, user, set_owner, skip_entities=skip_entities, prefix=SQL_PREFIX))
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    return '\n'.join(output)
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def sqlschema(schema, driver, text_index=True,
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              user=None, set_owner=False,
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              skip_relations=PURE_VIRTUAL_RTYPES, skip_entities=()):
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    """return the system sql schema, according to the given parameters"""
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    from yams.schema2sql import schema2sql
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    from cubicweb.server.sources import native
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    if set_owner:
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        assert user, 'user is argument required when set_owner is true'
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    output = []
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    w = output.append
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    w(native.sql_schema(driver))
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    w('')
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    dbhelper = db.get_db_helper(driver)
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    if text_index:
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        w(dbhelper.sql_init_fti().replace(';', ';;'))
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        w('')
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    w(schema2sql(dbhelper, schema, prefix=SQL_PREFIX,
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                 skip_entities=skip_entities,
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                 skip_relations=skip_relations).replace(';', ';;'))
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    if dbhelper.users_support and user:
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        w('')
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        w(sqlgrants(schema, driver, user, text_index, set_owner,
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                    skip_relations, skip_entities).replace(';', ';;'))
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    return '\n'.join(output)
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def sqldropschema(schema, driver, text_index=True,
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                  skip_relations=PURE_VIRTUAL_RTYPES, skip_entities=()):
0
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    """return the sql to drop the schema, according to the given parameters"""
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    from yams.schema2sql import dropschema2sql
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    from cubicweb.server.sources import native
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    output = []
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    w = output.append
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    if text_index:
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        dbhelper = db.get_db_helper(driver)
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        w(dbhelper.sql_drop_fti())
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        w('')
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    w(dropschema2sql(dbhelper, schema, prefix=SQL_PREFIX,
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                     skip_entities=skip_entities,
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                     skip_relations=skip_relations))
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    w('')
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    w(native.sql_drop_schema(driver))
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    return '\n'.join(output)
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_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION = re.compile('^(?!(sql|pg)_)').match
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def sql_drop_all_user_tables(driver_or_helper, sqlcursor):
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    """Return ths sql to drop all tables found in the database system."""
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    if not getattr(driver_or_helper, 'list_tables', None):
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        dbhelper = db.get_db_helper(driver_or_helper)
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    else:
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        dbhelper = driver_or_helper
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    cmds = [dbhelper.sql_drop_sequence('entities_id_seq')]
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    # for mssql, we need to drop views before tables
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    if hasattr(dbhelper, 'list_views'):
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        cmds += ['DROP VIEW %s;' % name
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                 for name in ifilter(_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION, dbhelper.list_views(sqlcursor))]
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    cmds += ['DROP TABLE %s;' % name
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             for name in ifilter(_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION, dbhelper.list_tables(sqlcursor))]
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    return '\n'.join(cmds)
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0
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class SQLAdapterMixIn(object):
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    """Mixin for SQL data sources, getting a connection from a configuration
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    dictionary and handling connection locking
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    """
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0
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    def __init__(self, source_config):
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        try:
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            self.dbdriver = source_config['db-driver'].lower()
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            dbname = source_config['db-name']
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        except KeyError:
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            raise ConfigurationError('missing some expected entries in sources file')
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        dbhost = source_config.get('db-host')
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        port = source_config.get('db-port')
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        dbport = port and int(port) or None
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   194
        dbuser = source_config.get('db-user')
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        dbpassword = source_config.get('db-password')
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        dbencoding = source_config.get('db-encoding', 'UTF-8')
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        dbextraargs = source_config.get('db-extra-arguments')
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        self.dbhelper = db.get_db_helper(self.dbdriver)
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        self.dbhelper.record_connection_info(dbname, dbhost, dbport, dbuser,
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   200
                                             dbpassword, dbextraargs,
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   201
                                             dbencoding)
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        self.sqlgen = SQLGenerator()
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        # copy back some commonly accessed attributes
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   204
        dbapi_module = self.dbhelper.dbapi_module
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        self.OperationalError = dbapi_module.OperationalError
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        self.InterfaceError = dbapi_module.InterfaceError
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        self.DbapiError = dbapi_module.Error
6379
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diff changeset
   208
        self._binary = self.dbhelper.binary_value
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   209
        self._process_value = dbapi_module.process_value
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        self._dbencoding = dbencoding
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   211
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    def get_connection(self):
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        """open and return a connection to the database"""
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        return self.dbhelper.get_connection()
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    def backup_to_file(self, backupfile, confirm):
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        for cmd in self.dbhelper.backup_commands(backupfile,
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                                                 keepownership=False):
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            if _run_command(cmd):
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                if not confirm('   [Failed] Continue anyway?', default='n'):
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                    raise Exception('Failed command: %s' % cmd)
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    def restore_from_file(self, backupfile, confirm, drop=True):
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        for cmd in self.dbhelper.restore_commands(backupfile,
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                                                  keepownership=False,
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                                                  drop=drop):
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            if _run_command(cmd):
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                if not confirm('   [Failed] Continue anyway?', default='n'):
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                    raise Exception('Failed command: %s' % cmd)
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    def merge_args(self, args, query_args):
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        if args is not None:
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            newargs = {}
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            for key, val in args.iteritems():
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                # convert cubicweb binary into db binary
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                if isinstance(val, Binary):
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                    val = self._binary(val.getvalue())
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                newargs[key] = val
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            # should not collide
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            newargs.update(query_args)
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            return newargs
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        return query_args
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    def process_result(self, cursor, column_callbacks=None, session=None):
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        """return a list of CubicWeb compliant values from data in the given cursor
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        """
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        return list(self.iter_process_result(cursor, column_callbacks, session))
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    def iter_process_result(self, cursor, column_callbacks=None, session=None):
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        """return a iterator on tuples of CubicWeb compliant values from data
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        in the given cursor
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        """
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        # use two different implementations to avoid paying the price of
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        # callback lookup for each *cell* in results when there is nothing to
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        # lookup
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        if not column_callbacks:
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            return self.dbhelper.dbapi_module.process_cursor(cursor, self._dbencoding,
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                                                             Binary)
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        assert session
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        return self._cb_process_result(cursor, column_callbacks, session)
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    def _cb_process_result(self, cursor, column_callbacks, session):
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        # begin bind to locals for optimization
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        descr = cursor.description
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        encoding = self._dbencoding
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        process_value = self._process_value
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        binary = Binary
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        # /end
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        cursor.arraysize = 100
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        while True:
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            results = cursor.fetchmany()
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            if not results:
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                break
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            for line in results:
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                result = []
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                for col, value in enumerate(line):
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                    if value is None:
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                        result.append(value)
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                        continue
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                    cbstack = column_callbacks.get(col, None)
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                    if cbstack is None:
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                        value = process_value(value, descr[col], encoding, binary)
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                    else:
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                        for cb in cbstack:
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                            value = cb(self, session, value)
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                    result.append(value)
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                yield result
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    def preprocess_entity(self, entity):
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        """return a dictionary to use as extra argument to cursor.execute
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        to insert/update an entity into a SQL database
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        """
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        attrs = {}
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        eschema = entity.e_schema
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        converters = getattr(self.dbhelper, 'TYPE_CONVERTERS', {})
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        for attr, value in entity.cw_edited.iteritems():
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            if value is not None and eschema.subjrels[attr].final:
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                atype = str(entity.e_schema.destination(attr))
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                if atype in converters:
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                    # It is easier to modify preprocess_entity rather
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                    # than add_entity (native) as this behavior
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                    # may also be used for update.
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                    value = converters[atype](value)
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                elif atype == 'Password': # XXX could be done using a TYPE_CONVERTERS callback
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                    # if value is a Binary instance, this mean we got it
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                    # from a query result and so it is already encrypted
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                    if isinstance(value, Binary):
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                        value = value.getvalue()
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                    else:
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                        value = crypt_password(value)
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                    value = self._binary(value)
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                elif isinstance(value, Binary):
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                    value = self._binary(value.getvalue())
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            attrs[SQL_PREFIX+str(attr)] = value
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        attrs[SQL_PREFIX+'eid'] = entity.eid
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        return attrs
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b8e35cde46e9 help pylint by explicitely defining some attributes
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6379
diff changeset
   318
    # these are overridden by set_log_methods below
b8e35cde46e9 help pylint by explicitely defining some attributes
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6379
diff changeset
   319
    # only defining here to prevent pylint from complaining
b8e35cde46e9 help pylint by explicitely defining some attributes
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6379
diff changeset
   320
    info = warning = error = critical = exception = debug = lambda msg,*a,**kw: None
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   321
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   322
from logging import getLogger
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   323
from cubicweb import set_log_methods
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   324
set_log_methods(SQLAdapterMixIn, getLogger('cubicweb.sqladapter'))
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   325
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   326
def init_sqlite_connexion(cnx):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   327
4831
c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4719
diff changeset
   328
    class group_concat(object):
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   329
        def __init__(self):
9364
73bd5012336f Make the GROUP_CONCAT aggregate function not repeat values (closes #3223975)
Julien Cristau <julien.cristau@logilab.fr>
parents: 9340
diff changeset
   330
            self.values = set()
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   331
        def step(self, value):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
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   332
            if value is not None:
9364
73bd5012336f Make the GROUP_CONCAT aggregate function not repeat values (closes #3223975)
Julien Cristau <julien.cristau@logilab.fr>
parents: 9340
diff changeset
   333
                self.values.add(value)
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   334
        def finalize(self):
9335
7da91456be2c [sqlutils] fix sqlite group_concat harder (related to #3331906)
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9334
diff changeset
   335
            return ', '.join(unicode(v) for v in self.values)
9334
ea12401c0a68 [sqlutils] avoid a crash with sqlite when using group_concat (closes #3331906)
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9267
diff changeset
   336
4831
c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4719
diff changeset
   337
    cnx.create_aggregate("GROUP_CONCAT", 1, group_concat)
1619
e4845b54a704 force proper date/datetime according to type (necessary for sqlite at least)
sylvain.thenault@logilab.fr
parents: 1408
diff changeset
   338
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   339
    def _limit_size(text, maxsize, format='text/plain'):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   340
        if len(text) < maxsize:
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   341
            return text
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   342
        if format in ('text/html', 'text/xhtml', 'text/xml'):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   343
            text = remove_html_tags(text)
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   344
        if len(text) > maxsize:
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   345
            text = text[:maxsize] + '...'
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   346
        return text
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   347
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   348
    def limit_size3(text, format, maxsize):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   349
        return _limit_size(text, maxsize, format)
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   350
    cnx.create_function("LIMIT_SIZE", 3, limit_size3)
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   351
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   352
    def limit_size2(text, maxsize):
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   353
        return _limit_size(text, maxsize)
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   354
    cnx.create_function("TEXT_LIMIT_SIZE", 2, limit_size2)
4831
c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4719
diff changeset
   355
7904
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   356
    from logilab.common.date import strptime
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   357
    def weekday(ustr):
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   358
        try:
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   359
            dt = strptime(ustr, '%Y-%m-%d %H:%M:%S')
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   360
        except:
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   361
            dt =  strptime(ustr, '%Y-%m-%d')
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   362
        # expect sunday to be 1, saturday 7 while weekday method return 0 for
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   363
        # monday
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   364
        return (dt.weekday() + 1) % 7
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   365
    cnx.create_function("WEEKDAY", 1, weekday)
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7341
diff changeset
   366
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   367
    import yams.constraints
4831
c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4719
diff changeset
   368
    yams.constraints.patch_sqlite_decimal()
0
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   369
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   370
sqlite_hooks = SQL_CONNECT_HOOKS.setdefault('sqlite', [])
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Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents:
diff changeset
   371
sqlite_hooks.append(init_sqlite_connexion)
7166
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   372
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   373
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   374
def init_postgres_connexion(cnx):
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   375
    cnx.cursor().execute('SET TIME ZONE UTC')
7229
a60522259c2c [tz postgres support] we've to commit the connection once time-zone is set, else we may loose the setting
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7221
diff changeset
   376
    # commit is needed, else setting are lost if the connection is first
9267
24d9b86dfa54 spelling: rollbacked -> rolled back
Rémi Cardona <remi.cardona@logilab.fr>
parents: 8944
diff changeset
   377
    # rolled back
7229
a60522259c2c [tz postgres support] we've to commit the connection once time-zone is set, else we may loose the setting
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7221
diff changeset
   378
    cnx.commit()
7166
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   379
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   380
postgres_hooks = SQL_CONNECT_HOOKS.setdefault('postgres', [])
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   381
postgres_hooks.append(init_postgres_connexion)