server/sqlutils.py
author Pierre-Yves David <pierre-yves.david@logilab.fr>
Tue, 25 Jun 2013 10:59:01 +0200
changeset 9070 4a803380f718
parent 8944 b167f039b6cb
child 9267 24d9b86dfa54
permissions -rw-r--r--
PARTIAL: Using the repoapi in test Test now use the repoapi.ClientConnection to access the repo. This is very big change. The current method to access the repo are kept for backward compatibility. The new methods will be introduced much later. The TestCase keep a ClientConnection To an admin session for the whole test. This changeset does not makes all tests pass without the next one that change set htt without the next one that change the http stack
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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# copyright 2003-2011 LOGILAB S.A. (Paris, FRANCE), all rights reserved.
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# contact http://www.logilab.fr/ -- mailto:contact@logilab.fr
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#
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# This file is part of CubicWeb.
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#
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# CubicWeb is free software: you can redistribute it and/or modify it under the
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# terms of the GNU Lesser General Public License as published by the Free
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# Software Foundation, either version 2.1 of the License, or (at your option)
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# any later version.
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#
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# CubicWeb is distributed in the hope that it will be useful, but WITHOUT
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# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
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# FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
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# details.
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#
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# You should have received a copy of the GNU Lesser General Public License along
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# with CubicWeb.  If not, see <http://www.gnu.org/licenses/>.
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"""SQL utilities functions and classes."""
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__docformat__ = "restructuredtext en"
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import os
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import re
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import subprocess
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from datetime import datetime, date
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from itertools import ifilter
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from logilab import database as db, common as lgc
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from logilab.common.shellutils import ProgressBar
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from logilab.common.date import todate, todatetime, utcdatetime, utctime
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from logilab.database.sqlgen import SQLGenerator
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from cubicweb import Binary, ConfigurationError
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from cubicweb.uilib import remove_html_tags
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from cubicweb.schema import PURE_VIRTUAL_RTYPES
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from cubicweb.server import SQL_CONNECT_HOOKS
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from cubicweb.server.utils import crypt_password
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from rql.utils import RQL_FUNCTIONS_REGISTRY
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lgc.USE_MX_DATETIME = False
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SQL_PREFIX = 'cw_'
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def _run_command(cmd):
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    """backup/restore command are string w/ lgc < 0.47, lists with earlier versions
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    """
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    if isinstance(cmd, basestring):
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        print '->', cmd
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        return subprocess.call(cmd, shell=True)
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    print ' '.join(cmd)
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    return subprocess.call(cmd)
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def sqlexec(sqlstmts, cursor_or_execute, withpb=not os.environ.get('APYCOT_ROOT'),
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            pbtitle='', delimiter=';', cnx=None):
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    """execute sql statements ignoring DROP/ CREATE GROUP or USER statements
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    error.
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    :sqlstmts_as_string: a string or a list of sql statements.
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    :cursor_or_execute: sql cursor or a callback used to execute statements
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    :cnx: if given, commit/rollback at each statement.
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    :withpb: if True, display a progresse bar
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    :pbtitle: a string displayed as the progress bar title (if `withpb=True`)
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    :delimiter: a string used to split sqlstmts (if it is a string)
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    Return the failed statements (same type as sqlstmts)
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    """
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    if hasattr(cursor_or_execute, 'execute'):
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        execute = cursor_or_execute.execute
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    else:
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        execute = cursor_or_execute
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    sqlstmts_as_string = False
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    if isinstance(sqlstmts, basestring):
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        sqlstmts_as_string = True
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        sqlstmts = sqlstmts.split(delimiter)
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    if withpb:
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        pb = ProgressBar(len(sqlstmts), title=pbtitle)
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    failed = []
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    for sql in sqlstmts:
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        sql = sql.strip()
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        if withpb:
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            pb.update()
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        if not sql:
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            continue
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        try:
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            # some dbapi modules doesn't accept unicode for sql string
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            execute(str(sql))
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        except Exception, err:
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            if cnx:
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                cnx.rollback()
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            failed.append(sql)
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        else:
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            if cnx:
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                cnx.commit()
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    if withpb:
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        print
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    if sqlstmts_as_string:
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        failed = delimiter.join(failed)
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    return failed
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def sqlgrants(schema, driver, user,
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              text_index=True, set_owner=True,
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              skip_relations=(), skip_entities=()):
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    """return sql to give all access privileges to the given user on the system
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    schema
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    """
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    from yams.schema2sql import grant_schema
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    from cubicweb.server.sources import native
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    output = []
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    w = output.append
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    w(native.grant_schema(user, set_owner))
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    w('')
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    if text_index:
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        dbhelper = db.get_db_helper(driver)
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        w(dbhelper.sql_grant_user_on_fti(user))
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        w('')
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    w(grant_schema(schema, user, set_owner, skip_entities=skip_entities, prefix=SQL_PREFIX))
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    return '\n'.join(output)
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def sqlschema(schema, driver, text_index=True,
0
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              user=None, set_owner=False,
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              skip_relations=PURE_VIRTUAL_RTYPES, skip_entities=()):
0
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    """return the system sql schema, according to the given parameters"""
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    from yams.schema2sql import schema2sql
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    from cubicweb.server.sources import native
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    if set_owner:
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        assert user, 'user is argument required when set_owner is true'
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    output = []
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    w = output.append
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    w(native.sql_schema(driver))
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    w('')
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    dbhelper = db.get_db_helper(driver)
0
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    if text_index:
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        w(dbhelper.sql_init_fti().replace(';', ';;'))
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        w('')
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    w(schema2sql(dbhelper, schema, prefix=SQL_PREFIX,
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                 skip_entities=skip_entities,
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                 skip_relations=skip_relations).replace(';', ';;'))
0
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    if dbhelper.users_support and user:
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        w('')
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        w(sqlgrants(schema, driver, user, text_index, set_owner,
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                    skip_relations, skip_entities).replace(';', ';;'))
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    return '\n'.join(output)
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def sqldropschema(schema, driver, text_index=True,
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                  skip_relations=PURE_VIRTUAL_RTYPES, skip_entities=()):
0
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    """return the sql to drop the schema, according to the given parameters"""
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    from yams.schema2sql import dropschema2sql
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    from cubicweb.server.sources import native
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    output = []
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    w = output.append
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    if text_index:
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        dbhelper = db.get_db_helper(driver)
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        w(dbhelper.sql_drop_fti())
0
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        w('')
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    w(dropschema2sql(dbhelper, schema, prefix=SQL_PREFIX,
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                     skip_entities=skip_entities,
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                     skip_relations=skip_relations))
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    w('')
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    w(native.sql_drop_schema(driver))
0
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    return '\n'.join(output)
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_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION = re.compile('^(?!(sql|pg)_)').match
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def sql_drop_all_user_tables(driver_or_helper, sqlcursor):
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    """Return ths sql to drop all tables found in the database system."""
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    if not getattr(driver_or_helper, 'list_tables', None):
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        dbhelper = db.get_db_helper(driver_or_helper)
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    else:
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        dbhelper = driver_or_helper
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    cmds = [dbhelper.sql_drop_sequence('entities_id_seq')]
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    # for mssql, we need to drop views before tables
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   178
    if hasattr(dbhelper, 'list_views'):
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        cmds += ['DROP VIEW %s;' % name
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                 for name in ifilter(_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION, dbhelper.list_views(sqlcursor))]
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   181
    cmds += ['DROP TABLE %s;' % name
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             for name in ifilter(_SQL_DROP_ALL_USER_TABLES_FILTER_FUNCTION, dbhelper.list_tables(sqlcursor))]
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   183
    return '\n'.join(cmds)
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diff changeset
   184
0
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class SQLAdapterMixIn(object):
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    """Mixin for SQL data sources, getting a connection from a configuration
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    dictionary and handling connection locking
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    """
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0
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    def __init__(self, source_config):
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        try:
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            self.dbdriver = source_config['db-driver'].lower()
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            dbname = source_config['db-name']
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        except KeyError:
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   195
            raise ConfigurationError('missing some expected entries in sources file')
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   196
        dbhost = source_config.get('db-host')
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        port = source_config.get('db-port')
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   198
        dbport = port and int(port) or None
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   199
        dbuser = source_config.get('db-user')
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   200
        dbpassword = source_config.get('db-password')
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   201
        dbencoding = source_config.get('db-encoding', 'UTF-8')
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   202
        dbextraargs = source_config.get('db-extra-arguments')
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   203
        self.dbhelper = db.get_db_helper(self.dbdriver)
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   204
        self.dbhelper.record_connection_info(dbname, dbhost, dbport, dbuser,
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   205
                                             dbpassword, dbextraargs,
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diff changeset
   206
                                             dbencoding)
0
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   207
        self.sqlgen = SQLGenerator()
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   208
        # copy back some commonly accessed attributes
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diff changeset
   209
        dbapi_module = self.dbhelper.dbapi_module
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   210
        self.OperationalError = dbapi_module.OperationalError
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diff changeset
   211
        self.InterfaceError = dbapi_module.InterfaceError
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diff changeset
   212
        self.DbapiError = dbapi_module.Error
6379
3f67f7ea5632 [R] use dbhelper.binary_value to process passwords and other Bytes fields
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diff changeset
   213
        self._binary = self.dbhelper.binary_value
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diff changeset
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        self._process_value = dbapi_module.process_value
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        self._dbencoding = dbencoding
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    def get_connection(self):
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        """open and return a connection to the database"""
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        return self.dbhelper.get_connection()
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    def backup_to_file(self, backupfile, confirm):
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        for cmd in self.dbhelper.backup_commands(backupfile,
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                                                 keepownership=False):
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            if _run_command(cmd):
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                if not confirm('   [Failed] Continue anyway?', default='n'):
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                    raise Exception('Failed command: %s' % cmd)
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    def restore_from_file(self, backupfile, confirm, drop=True):
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        for cmd in self.dbhelper.restore_commands(backupfile,
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                                                  keepownership=False,
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                                                  drop=drop):
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            if _run_command(cmd):
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                if not confirm('   [Failed] Continue anyway?', default='n'):
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                    raise Exception('Failed command: %s' % cmd)
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    def merge_args(self, args, query_args):
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        if args is not None:
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            newargs = {}
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            for key, val in args.iteritems():
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                # convert cubicweb binary into db binary
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                if isinstance(val, Binary):
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                    val = self._binary(val.getvalue())
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                newargs[key] = val
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            # should not collide
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            newargs.update(query_args)
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            return newargs
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        return query_args
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    def process_result(self, cursor, column_callbacks=None, session=None):
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        """return a list of CubicWeb compliant values from data in the given cursor
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        """
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        return list(self.iter_process_result(cursor, column_callbacks, session))
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    def iter_process_result(self, cursor, column_callbacks=None, session=None):
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        """return a iterator on tuples of CubicWeb compliant values from data
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        in the given cursor
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        """
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        # use two different implementations to avoid paying the price of
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        # callback lookup for each *cell* in results when there is nothing to
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        # lookup
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        if not column_callbacks:
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            return self.dbhelper.dbapi_module.process_cursor(cursor, self._dbencoding,
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                                                             Binary)
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        assert session
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        return self._cb_process_result(cursor, column_callbacks, session)
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    def _cb_process_result(self, cursor, column_callbacks, session):
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        # begin bind to locals for optimization
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        descr = cursor.description
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        encoding = self._dbencoding
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        process_value = self._process_value
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        binary = Binary
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        # /end
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        cursor.arraysize = 100
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        while True:
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            results = cursor.fetchmany()
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            if not results:
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                break
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            for line in results:
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                result = []
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                for col, value in enumerate(line):
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                    if value is None:
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                        result.append(value)
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                        continue
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                    cbstack = column_callbacks.get(col, None)
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                    if cbstack is None:
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                        value = process_value(value, descr[col], encoding, binary)
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                    else:
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                        for cb in cbstack:
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                            value = cb(self, session, value)
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                    result.append(value)
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                yield result
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    def preprocess_entity(self, entity):
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        """return a dictionary to use as extra argument to cursor.execute
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        to insert/update an entity into a SQL database
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        """
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        attrs = {}
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        eschema = entity.e_schema
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        converters = getattr(self.dbhelper, 'TYPE_CONVERTERS', {})
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        for attr, value in entity.cw_edited.iteritems():
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            if value is not None and eschema.subjrels[attr].final:
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                atype = str(entity.e_schema.destination(attr))
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                if atype in converters:
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                    # It is easier to modify preprocess_entity rather
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                    # than add_entity (native) as this behavior
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                    # may also be used for update.
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                    value = converters[atype](value)
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                elif atype == 'Password': # XXX could be done using a TYPE_CONVERTERS callback
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                    # if value is a Binary instance, this mean we got it
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                    # from a query result and so it is already encrypted
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                    if isinstance(value, Binary):
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                        value = value.getvalue()
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                    else:
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                        value = crypt_password(value)
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                    value = self._binary(value)
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                elif isinstance(value, Binary):
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                    value = self._binary(value.getvalue())
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af40e615dc89 introduce a 'cw_' prefix on entity table and column names so we don't conflict with sql or DBMS specific keywords
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   319
            attrs[SQL_PREFIX+str(attr)] = value
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04543ed0bbdc [source] only consider edited_attributes in source.preprocess_entity()
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        attrs[SQL_PREFIX+'eid'] = entity.eid
0
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        return attrs
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   323
    # these are overridden by set_log_methods below
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   324
    # only defining here to prevent pylint from complaining
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   325
    info = warning = error = critical = exception = debug = lambda msg,*a,**kw: None
0
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   326
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from logging import getLogger
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from cubicweb import set_log_methods
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set_log_methods(SQLAdapterMixIn, getLogger('cubicweb.sqladapter'))
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def init_sqlite_connexion(cnx):
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   333
    class group_concat(object):
0
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        def __init__(self):
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            self.values = []
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        def step(self, value):
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            if value is not None:
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                self.values.append(value)
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        def finalize(self):
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            return ', '.join(self.values)
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parents: 4719
diff changeset
   341
    cnx.create_aggregate("GROUP_CONCAT", 1, group_concat)
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parents: 1408
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   342
0
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   343
    def _limit_size(text, maxsize, format='text/plain'):
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        if len(text) < maxsize:
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            return text
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   346
        if format in ('text/html', 'text/xhtml', 'text/xml'):
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   347
            text = remove_html_tags(text)
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   348
        if len(text) > maxsize:
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   349
            text = text[:maxsize] + '...'
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   350
        return text
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   351
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   352
    def limit_size3(text, format, maxsize):
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   353
        return _limit_size(text, maxsize, format)
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   354
    cnx.create_function("LIMIT_SIZE", 3, limit_size3)
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   355
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   356
    def limit_size2(text, maxsize):
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diff changeset
   357
        return _limit_size(text, maxsize)
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   358
    cnx.create_function("TEXT_LIMIT_SIZE", 2, limit_size2)
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c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
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parents: 4719
diff changeset
   359
7904
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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parents: 7341
diff changeset
   360
    from logilab.common.date import strptime
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diff changeset
   361
    def weekday(ustr):
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   362
        try:
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diff changeset
   363
            dt = strptime(ustr, '%Y-%m-%d %H:%M:%S')
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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parents: 7341
diff changeset
   364
        except:
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   365
            dt =  strptime(ustr, '%Y-%m-%d')
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   366
        # expect sunday to be 1, saturday 7 while weekday method return 0 for
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   367
        # monday
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diff changeset
   368
        return (dt.weekday() + 1) % 7
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   369
    cnx.create_function("WEEKDAY", 1, weekday)
f41bb38dda7c [rql, sql] support for weekday function introduced in lgdp 1.7 (closes #1979717)
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diff changeset
   370
0
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diff changeset
   371
    import yams.constraints
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c5aec27c1bf7 [repo] use logilab.db instead of lgc.adbh/lgc.db/lgc.sqlgen/indexer, test new date extranction functions
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diff changeset
   372
    yams.constraints.patch_sqlite_decimal()
0
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diff changeset
   373
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   374
sqlite_hooks = SQL_CONNECT_HOOKS.setdefault('sqlite', [])
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diff changeset
   375
sqlite_hooks.append(init_sqlite_connexion)
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dde161937d3e [time zone] support for TZDatetime and TZTime data type
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parents: 7083
diff changeset
   376
dde161937d3e [time zone] support for TZDatetime and TZTime data type
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parents: 7083
diff changeset
   377
dde161937d3e [time zone] support for TZDatetime and TZTime data type
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diff changeset
   378
def init_postgres_connexion(cnx):
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   379
    cnx.cursor().execute('SET TIME ZONE UTC')
7229
a60522259c2c [tz postgres support] we've to commit the connection once time-zone is set, else we may loose the setting
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7221
diff changeset
   380
    # commit is needed, else setting are lost if the connection is first
a60522259c2c [tz postgres support] we've to commit the connection once time-zone is set, else we may loose the setting
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parents: 7221
diff changeset
   381
    # rollbacked
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parents: 7221
diff changeset
   382
    cnx.commit()
7166
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   383
dde161937d3e [time zone] support for TZDatetime and TZTime data type
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7083
diff changeset
   384
postgres_hooks = SQL_CONNECT_HOOKS.setdefault('postgres', [])
dde161937d3e [time zone] support for TZDatetime and TZTime data type
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parents: 7083
diff changeset
   385
postgres_hooks.append(init_postgres_connexion)