cubicweb/dataimport/csv.py
author Philippe Pepiot <ph@itsalwaysdns.eu>
Mon, 30 Mar 2020 15:23:56 +0200
changeset 12960 2c3a8a4f5a02
parent 12567 26744ad37953
permissions -rw-r--r--
[server] extract creating a new cnxset in a _new_cnxset() helper So we can move logic specific to _CnxSetPool here.
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     1
# copyright 2003-2015 LOGILAB S.A. (Paris, FRANCE), all rights reserved.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     2
# contact http://www.logilab.fr/ -- mailto:contact@logilab.fr
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     3
#
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     4
# This file is part of CubicWeb.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     5
#
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     6
# CubicWeb is free software: you can redistribute it and/or modify it under the
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     7
# terms of the GNU Lesser General Public License as published by the Free
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     8
# Software Foundation, either version 2.1 of the License, or (at your option)
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
     9
# any later version.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    10
#
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    11
# CubicWeb is distributed in the hope that it will be useful, but WITHOUT
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    12
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    13
# FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    14
# details.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    15
#
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    16
# You should have received a copy of the GNU Lesser General Public License along
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    17
# with CubicWeb.  If not, see <http://www.gnu.org/licenses/>.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    18
"""Functions to help importing CSV data"""
10807
bb0c7dbd1fe7 [dataimport] fix ucsvreader for python3
Julien Cristau <julien.cristau@logilab.fr>
parents: 10669
diff changeset
    19
import codecs
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    20
import csv as csvmod
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    21
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    22
from logilab.common import shellutils
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    23
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    24
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    25
def count_lines(stream_or_filename):
12567
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    26
    if isinstance(stream_or_filename, str):
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    27
        f = open(stream_or_filename)
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    28
    else:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    29
        f = stream_or_filename
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    30
        f.seek(0)
11404
98eebbe3de23 merge 3.20.16 in 3.21
David Douard <david.douard@logilab.fr>
parents: 10513
diff changeset
    31
    i = 0  # useful is f is an empty file
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    32
    for i, line in enumerate(f):
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    33
        pass
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    34
    f.seek(0)
11313
682b15eb2dd2 [dataimport] flake8
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 11057
diff changeset
    35
    return i + 1
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    36
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    37
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    38
def ucsvreader_pb(stream_or_path, encoding='utf-8', delimiter=',', quotechar='"',
12504
362fdb399ff5 Drop deprecated code in cubicweb.dataimport
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 11461
diff changeset
    39
                  skipfirst=False, withpb=True, skip_empty=True):
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    40
    """same as :func:`ucsvreader` but a progress bar is displayed as we iter on rows"""
12567
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    41
    if isinstance(stream_or_path, str):
10807
bb0c7dbd1fe7 [dataimport] fix ucsvreader for python3
Julien Cristau <julien.cristau@logilab.fr>
parents: 10669
diff changeset
    42
        stream = open(stream_or_path, 'rb')
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    43
    else:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    44
        stream = stream_or_path
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    45
    rowcount = count_lines(stream)
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    46
    if skipfirst:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    47
        rowcount -= 1
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    48
    if withpb:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    49
        pb = shellutils.ProgressBar(rowcount, 50)
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    50
    for urow in ucsvreader(stream, encoding, delimiter, quotechar,
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    51
                           skipfirst=skipfirst, skip_empty=skip_empty):
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    52
        yield urow
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    53
        if withpb:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    54
            pb.update()
10589
7c23b7de2b8d [py3k] print function
Samuel Trégouët <samuel.tregouet@logilab.fr>
parents: 10513
diff changeset
    55
    print(' %s rows imported' % rowcount)
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    56
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    57
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    58
def ucsvreader(stream, encoding='utf-8', delimiter=',', quotechar='"',
12504
362fdb399ff5 Drop deprecated code in cubicweb.dataimport
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 11461
diff changeset
    59
               skipfirst=False, ignore_errors=False, skip_empty=True):
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    60
    """A csv reader that accepts files with any encoding and outputs unicode
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    61
    strings
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    62
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    63
    if skip_empty (the default), lines without any values specified (only
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    64
    separators) will be skipped. This is useful for Excel exports which may be
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    65
    full of such lines.
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    66
    """
12567
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    67
    stream = codecs.getreader(encoding)(stream)
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    68
    it = iter(csvmod.reader(stream, delimiter=delimiter, quotechar=quotechar))
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    69
    if not ignore_errors:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    70
        if skipfirst:
10669
155c29e0ed1c [py3k] use next builtin instead of next method
Rémi Cardona <remi.cardona@logilab.fr>
parents: 10612
diff changeset
    71
            next(it)
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    72
        for row in it:
12567
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    73
            if not skip_empty or any(row):
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    74
                yield row
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    75
    else:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    76
        if skipfirst:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    77
            try:
10669
155c29e0ed1c [py3k] use next builtin instead of next method
Rémi Cardona <remi.cardona@logilab.fr>
parents: 10612
diff changeset
    78
                row = next(it)
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    79
            except csvmod.Error:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    80
                pass
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    81
        # Safe version, that can cope with error in CSV file
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    82
        while True:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    83
            try:
10669
155c29e0ed1c [py3k] use next builtin instead of next method
Rémi Cardona <remi.cardona@logilab.fr>
parents: 10612
diff changeset
    84
                row = next(it)
10513
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    85
            # End of CSV, break
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    86
            except StopIteration:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    87
                break
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    88
            # Error in CSV, ignore line and continue
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    89
            except csvmod.Error:
7bec01a59f92 [dataimport] dispatch and deprecate old code
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents:
diff changeset
    90
                continue
12567
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    91
            if not skip_empty or any(row):
26744ad37953 Drop python2 support
Denis Laxalde <denis.laxalde@logilab.fr>
parents: 12504
diff changeset
    92
                yield row