dataimport.py
author Alain Leufroy <alain.leufroy@logilab.fr>
Tue, 03 Jun 2014 12:37:54 +0200
changeset 9886 1b26289217a3
parent 9827 c7ce035aede8
child 9898 70056633085c
child 10269 d5e298df98d1
permissions -rw-r--r--
[devtools] improve error message when postgresql tools are missing By default in at least Debian, some pg tools are not present in the PATH. Or they may not be installed. But the tests tools expects them to be in the PATH, and give an unhelpful 'No such file or directory' backtrace if they're not found. To help devs using the pg tests we improve the error message.
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
     1
# -*- coding: utf-8 -*-
9463
d62e13eba033 [multi-sources-removal] Simplify ConnectionsSet internal structures and public methods
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9450
diff changeset
     2
# copyright 2003-2013 LOGILAB S.A. (Paris, FRANCE), all rights reserved.
5421
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     3
# contact http://www.logilab.fr/ -- mailto:contact@logilab.fr
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     4
#
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     5
# This file is part of CubicWeb.
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     6
#
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     7
# CubicWeb is free software: you can redistribute it and/or modify it under the
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     8
# terms of the GNU Lesser General Public License as published by the Free
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
     9
# Software Foundation, either version 2.1 of the License, or (at your option)
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    10
# any later version.
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    11
#
5424
8ecbcbff9777 replace logilab-common by CubicWeb in disclaimer
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5421
diff changeset
    12
# CubicWeb is distributed in the hope that it will be useful, but WITHOUT
5421
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    13
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    14
# FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    15
# details.
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    16
#
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    17
# You should have received a copy of the GNU Lesser General Public License along
8167de96c523 proper licensing information (LGPL-2.1). Hope I get it right this time.
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5097
diff changeset
    18
# with CubicWeb.  If not, see <http://www.gnu.org/licenses/>.
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    19
"""This module provides tools to import tabular data.
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    20
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    21
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    22
Example of use (run this with `cubicweb-ctl shell instance import-script.py`):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    23
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    24
.. sourcecode:: python
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    25
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    26
  from cubicweb.dataimport import *
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    27
  # define data generators
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    28
  GENERATORS = []
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    29
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    30
  USERS = [('Prenom', 'firstname', ()),
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    31
           ('Nom', 'surname', ()),
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    32
           ('Identifiant', 'login', ()),
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    33
           ]
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    34
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    35
  def gen_users(ctl):
6133
6f3eabbbdf2e use iter_and_commit in example
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6122
diff changeset
    36
      for row in ctl.iter_and_commit('utilisateurs'):
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    37
          entity = mk_entity(row, USERS)
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    38
          entity['upassword'] = 'motdepasse'
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    39
          ctl.check('login', entity['login'], None)
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    40
          entity = ctl.store.create_entity('CWUser', **entity)
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    41
          email = ctl.store.create_entity('EmailAddress', address=row['email'])
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    42
          ctl.store.relate(entity.eid, 'use_email', email.eid)
3003
2944ee420dca R [dataimport] rename uid to eid
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 2974
diff changeset
    43
          ctl.store.rql('SET U in_group G WHERE G name "users", U eid %(x)s', {'x':entity['eid']})
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    44
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    45
  CHK = [('login', check_doubles, 'Utilisateurs Login',
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    46
          'Deux utilisateurs ne devraient pas avoir le même login.'),
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    47
         ]
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    48
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    49
  GENERATORS.append( (gen_users, CHK) )
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    50
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    51
  # create controller
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    52
  if 'cnx' in globals():
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    53
      ctl = CWImportController(RQLObjectStore(cnx))
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    54
  else:
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    55
      print 'debug mode (not connected)'
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    56
      print 'run through cubicweb-ctl shell to access an instance'
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    57
      ctl = CWImportController(ObjectStore())
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
    58
  ctl.askerror = 1
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    59
  ctl.generators = GENERATORS
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    60
  ctl.data['utilisateurs'] = lazytable(ucsvreader(open('users.csv')))
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    61
  # run
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    62
  ctl.run()
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    63
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
    64
.. BUG file with one column are not parsable
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
    65
.. TODO rollback() invocation is not possible yet
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    66
"""
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    67
__docformat__ = "restructuredtext en"
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    68
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    69
import csv
4186
ca7e526b07b6 import cleanup, check data file exists
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4173
diff changeset
    70
import sys
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    71
import threading
4186
ca7e526b07b6 import cleanup, check data file exists
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4173
diff changeset
    72
import traceback
8926
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
    73
import warnings
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    74
import cPickle
4186
ca7e526b07b6 import cleanup, check data file exists
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4173
diff changeset
    75
import os.path as osp
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
    76
import inspect
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    77
from collections import defaultdict
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
    78
from copy import copy
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    79
from datetime import date, datetime
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    80
from time import asctime
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    81
from StringIO import StringIO
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    82
7159
3bcccd3ab6b6 [dataimport] ObjectStore.create_entity should return something that looks like an entity (eg no more using dict protocol to access to attributes)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7158
diff changeset
    83
from logilab.common import shellutils, attrdict
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
    84
from logilab.common.date import strptime
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
    85
from logilab.common.decorators import cached
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
    86
from logilab.common.deprecation import deprecated
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
    87
7171
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
    88
from cubicweb import QueryError
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    89
from cubicweb.utils import make_uid
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    90
from cubicweb.schema import META_RTYPES, VIRTUAL_RTYPES
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    91
from cubicweb.server.edition import EditedEntity
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
    92
from cubicweb.server.sqlutils import SQL_PREFIX
5066
bf5cbc351e99 [repo] move eschema_eid function from hooks.metadata to server.utils
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5063
diff changeset
    93
from cubicweb.server.utils import eschema_eid
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
    94
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
    95
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    96
def count_lines(stream_or_filename):
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    97
    if isinstance(stream_or_filename, basestring):
6492
47a284c0d012 fix some pylint detected errors
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6427
diff changeset
    98
        f = open(stream_or_filename)
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
    99
    else:
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   100
        f = stream_or_filename
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   101
        f.seek(0)
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   102
    for i, line in enumerate(f):
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   103
        pass
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   104
    f.seek(0)
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   105
    return i+1
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   106
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   107
def ucsvreader_pb(stream_or_path, encoding='utf-8', separator=',', quote='"',
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   108
                  skipfirst=False, withpb=True, skip_empty=True):
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   109
    """same as :func:`ucsvreader` but a progress bar is displayed as we iter on rows"""
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   110
    if isinstance(stream_or_path, basestring):
6492
47a284c0d012 fix some pylint detected errors
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6427
diff changeset
   111
        if not osp.exists(stream_or_path):
47a284c0d012 fix some pylint detected errors
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6427
diff changeset
   112
            raise Exception("file doesn't exists: %s" % stream_or_path)
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   113
        stream = open(stream_or_path)
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   114
    else:
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   115
        stream = stream_or_path
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   116
    rowcount = count_lines(stream)
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   117
    if skipfirst:
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   118
        rowcount -= 1
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   119
    if withpb:
4140
46ddd27a4ca4 tweaks output
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4136
diff changeset
   120
        pb = shellutils.ProgressBar(rowcount, 50)
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   121
    for urow in ucsvreader(stream, encoding, separator, quote,
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   122
                           skipfirst=skipfirst, skip_empty=skip_empty):
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   123
        yield urow
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   124
        if withpb:
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   125
            pb.update()
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   126
    print ' %s rows imported' % rowcount
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   127
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   128
def ucsvreader(stream, encoding='utf-8', separator=',', quote='"',
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   129
               skipfirst=False, ignore_errors=False, skip_empty=True):
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   130
    """A csv reader that accepts files with any encoding and outputs unicode
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   131
    strings
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   132
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   133
    if skip_empty (the default), lines without any values specified (only
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   134
    separators) will be skipped. This is useful for Excel exports which may be
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   135
    full of such lines.
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   136
    """
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   137
    it = iter(csv.reader(stream, delimiter=separator, quotechar=quote))
8637
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   138
    if not ignore_errors:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   139
        if skipfirst:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   140
            it.next()
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   141
        for row in it:
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   142
            decoded = [item.decode(encoding) for item in row]
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   143
            if not skip_empty or any(decoded):
9694
c90107199dea [dataimport] Avoid double unicode decoding in ucsvreader (closes #3705752)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9597
diff changeset
   144
                yield decoded
8637
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   145
    else:
9695
aa982b7c3f2a [dataimport] Prevent ucsvreader from skipping the first line when ignore_errors is True (closes #3705791)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9694
diff changeset
   146
        if skipfirst:
aa982b7c3f2a [dataimport] Prevent ucsvreader from skipping the first line when ignore_errors is True (closes #3705791)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9694
diff changeset
   147
            try:
aa982b7c3f2a [dataimport] Prevent ucsvreader from skipping the first line when ignore_errors is True (closes #3705791)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9694
diff changeset
   148
                row = it.next()
aa982b7c3f2a [dataimport] Prevent ucsvreader from skipping the first line when ignore_errors is True (closes #3705791)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9694
diff changeset
   149
            except csv.Error:
aa982b7c3f2a [dataimport] Prevent ucsvreader from skipping the first line when ignore_errors is True (closes #3705791)
Rémi Cardona <remi.cardona@logilab.fr>
parents: 9694
diff changeset
   150
                pass
8637
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   151
        # Safe version, that can cope with error in CSV file
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   152
        while True:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   153
            try:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   154
                row = it.next()
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   155
            # End of CSV, break
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   156
            except StopIteration:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   157
                break
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   158
            # Error in CSV, ignore line and continue
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   159
            except csv.Error:
e16561083d84 [dataimport] new ignore_errors argument to ucsvreader, default to False. Closes #2547200
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8631
diff changeset
   160
                continue
9181
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   161
            decoded = [item.decode(encoding) for item in row]
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   162
            if not skip_empty or any(decoded):
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   163
                yield decoded
2eac0aa1d3f6 [dataimport] ucsvreader should skip empty lines unless specified otherwise. Closes #3035944
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8970
diff changeset
   164
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   165
6136
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   166
def callfunc_every(func, number, iterable):
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   167
    """yield items of `iterable` one by one and call function `func`
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   168
    every `number` iterations. Always call function `func` at the end.
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   169
    """
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   170
    for idx, item in enumerate(iterable):
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   171
        yield item
7227
23d9c1f89c96 [dataimport] actually commit every desired number...
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7214
diff changeset
   172
        if not idx % number:
6136
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   173
            func()
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   174
    func()
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   175
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   176
def lazytable(reader):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   177
    """The first row is taken to be the header of the table and
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   178
    used to output a dict for each row of data.
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   179
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   180
    >>> data = lazytable(ucsvreader(open(filename)))
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   181
    """
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   182
    header = reader.next()
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   183
    for row in reader:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   184
        yield dict(zip(header, row))
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   185
7201
52f5831400b2 [dataimport] allow to specify columns on which result should be sorted in lazydbtable
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7171
diff changeset
   186
def lazydbtable(cu, table, headers, orderby=None):
7160
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   187
    """return an iterator on rows of a sql table. On each row, fetch columns
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   188
    defined in headers and return values as a dictionary.
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   189
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   190
    >>> data = lazydbtable(cu, 'experimentation', ('id', 'nickname', 'gps'))
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   191
    """
7201
52f5831400b2 [dataimport] allow to specify columns on which result should be sorted in lazydbtable
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7171
diff changeset
   192
    sql = 'SELECT %s FROM %s' % (','.join(headers), table,)
52f5831400b2 [dataimport] allow to specify columns on which result should be sorted in lazydbtable
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7171
diff changeset
   193
    if orderby:
52f5831400b2 [dataimport] allow to specify columns on which result should be sorted in lazydbtable
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7171
diff changeset
   194
        sql += ' ORDER BY %s' % ','.join(orderby)
52f5831400b2 [dataimport] allow to specify columns on which result should be sorted in lazydbtable
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7171
diff changeset
   195
    cu.execute(sql)
7160
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   196
    while True:
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   197
        row = cu.fetchone()
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   198
        if row is None:
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   199
            break
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   200
        yield dict(zip(headers, row))
923013173031 [dataimport] new 'lazydbtable' generator function to feed data from a database table
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7159
diff changeset
   201
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   202
def mk_entity(row, map):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   203
    """Return a dict made from sanitized mapped values.
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   204
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   205
    ValueError can be raised on unexpected values found in checkers
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   206
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   207
    >>> row = {'myname': u'dupont'}
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   208
    >>> map = [('myname', u'name', (call_transform_method('title'),))]
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   209
    >>> mk_entity(row, map)
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   210
    {'name': u'Dupont'}
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   211
    >>> row = {'myname': u'dupont', 'optname': u''}
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   212
    >>> map = [('myname', u'name', (call_transform_method('title'),)),
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   213
    ...        ('optname', u'MARKER', (optional,))]
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   214
    >>> mk_entity(row, map)
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   215
    {'name': u'Dupont', 'optname': None}
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   216
    """
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   217
    res = {}
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   218
    assert isinstance(row, dict)
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   219
    assert isinstance(map, list)
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   220
    for src, dest, funcs in map:
8406
f3bc8ca0b715 [data import] don't crash if value isn't in the file, simply no key/value in the output dict. Closes #2356328
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8403
diff changeset
   221
        try:
f3bc8ca0b715 [data import] don't crash if value isn't in the file, simply no key/value in the output dict. Closes #2356328
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8403
diff changeset
   222
            res[dest] = row[src]
f3bc8ca0b715 [data import] don't crash if value isn't in the file, simply no key/value in the output dict. Closes #2356328
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8403
diff changeset
   223
        except KeyError:
f3bc8ca0b715 [data import] don't crash if value isn't in the file, simply no key/value in the output dict. Closes #2356328
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 8403
diff changeset
   224
            continue
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   225
        try:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   226
            for func in funcs:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   227
                res[dest] = func(res[dest])
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   228
                if res[dest] is None:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   229
                    break
8695
358d8bed9626 [toward-py3k] rewrite to "except AnException as exc:" (part of #2711624)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 8637
diff changeset
   230
        except ValueError as err:
7170
32b5d9d43a7e [dataimport] propagate stack
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7160
diff changeset
   231
            raise ValueError('error with %r field: %s' % (src, err)), None, sys.exc_info()[-1]
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   232
    return res
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   233
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   234
# user interactions ############################################################
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   235
3029
bc573d5fb5b7 F [devtools] by default dataimport prints message on stdout
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 3003
diff changeset
   236
def tell(msg):
bc573d5fb5b7 F [devtools] by default dataimport prints message on stdout
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 3003
diff changeset
   237
    print msg
bc573d5fb5b7 F [devtools] by default dataimport prints message on stdout
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 3003
diff changeset
   238
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   239
def confirm(question):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   240
    """A confirm function that asks for yes/no/abort and exits on abort."""
4721
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   241
    answer = shellutils.ASK.ask(question, ('Y', 'n', 'abort'), 'Y')
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   242
    if answer == 'abort':
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   243
        sys.exit(1)
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   244
    return answer == 'Y'
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   245
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   246
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   247
class catch_error(object):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   248
    """Helper for @contextmanager decorator."""
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   249
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   250
    def __init__(self, ctl, key='unexpected error', msg=None):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   251
        self.ctl = ctl
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   252
        self.key = key
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   253
        self.msg = msg
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   254
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   255
    def __enter__(self):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   256
        return self
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   257
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   258
    def __exit__(self, type, value, traceback):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   259
        if type is not None:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   260
            if issubclass(type, (KeyboardInterrupt, SystemExit)):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   261
                return # re-raise
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   262
            if self.ctl.catcherrors:
4173
cfd5d3270f99 msg isn't defined there, but we've to give traceback information to record error
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4152
diff changeset
   263
                self.ctl.record_error(self.key, None, type, value, traceback)
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   264
                return True # silent
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   265
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   266
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   267
# base sanitizing/coercing functions ###########################################
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   268
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   269
def optional(value):
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   270
    """checker to filter optional field
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   271
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   272
    If value is undefined (ex: empty string), return None that will
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   273
    break the checkers validation chain
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   274
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   275
    General use is to add 'optional' check in first condition to avoid
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   276
    ValueError by further checkers
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   277
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   278
    >>> MAPPER = [(u'value', 'value', (optional, int))]
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   279
    >>> row = {'value': u'XXX'}
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   280
    >>> mk_entity(row, MAPPER)
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   281
    {'value': None}
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   282
    >>> row = {'value': u'100'}
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   283
    >>> mk_entity(row, MAPPER)
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   284
    {'value': 100}
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   285
    """
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   286
    if value:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   287
        return value
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   288
    return None
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   289
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   290
def required(value):
6136
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   291
    """raise ValueError if value is empty
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   292
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   293
    This check should be often found in last position in the chain.
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   294
    """
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   295
    if value:
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   296
        return value
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   297
    raise ValueError("required")
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   298
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   299
def todatetime(format='%d/%m/%Y'):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   300
    """return a transformation function to turn string input value into a
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   301
    `datetime.datetime` instance, using given format.
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   302
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   303
    Follow it by `todate` or `totime` functions from `logilab.common.date` if
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   304
    you want a `date`/`time` instance instead of `datetime`.
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   305
    """
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   306
    def coerce(value):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   307
        return strptime(value, format)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   308
    return coerce
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   309
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   310
def call_transform_method(methodname, *args, **kwargs):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   311
    """return value returned by calling the given method on input"""
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   312
    def coerce(value):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   313
        return getattr(value, methodname)(*args, **kwargs)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   314
    return coerce
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   315
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   316
def call_check_method(methodname, *args, **kwargs):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   317
    """check value returned by calling the given method on input is true,
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   318
    else raise ValueError
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   319
    """
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   320
    def check(value):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   321
        if getattr(value, methodname)(*args, **kwargs):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   322
            return value
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   323
        raise ValueError('%s not verified on %r' % (methodname, value))
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   324
    return check
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   325
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   326
# base integrity checking functions ############################################
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   327
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   328
def check_doubles(buckets):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   329
    """Extract the keys that have more than one item in their bucket."""
4721
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   330
    return [(k, len(v)) for k, v in buckets.items() if len(v) > 1]
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   331
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   332
def check_doubles_not_none(buckets):
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   333
    """Extract the keys that have more than one item in their bucket."""
4721
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   334
    return [(k, len(v)) for k, v in buckets.items()
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   335
            if k is not None and len(v) > 1]
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   336
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   337
# sql generator utility functions #############################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   338
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   339
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   340
def _import_statements(sql_connect, statements, nb_threads=3,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   341
                       dump_output_dir=None,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   342
                       support_copy_from=True, encoding='utf-8'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   343
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   344
    Import a bunch of sql statements, using different threads.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   345
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   346
    try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   347
        chunksize = (len(statements) / nb_threads) + 1
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   348
        threads = []
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   349
        for i in xrange(nb_threads):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   350
            chunks = statements[i*chunksize:(i+1)*chunksize]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   351
            thread = threading.Thread(target=_execmany_thread,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   352
                                      args=(sql_connect, chunks,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   353
                                            dump_output_dir,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   354
                                            support_copy_from,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   355
                                            encoding))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   356
            thread.start()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   357
            threads.append(thread)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   358
        for t in threads:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   359
            t.join()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   360
    except Exception:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   361
        print 'Error in import statements'
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   362
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   363
def _execmany_thread_not_copy_from(cu, statement, data, table=None,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   364
                                   columns=None, encoding='utf-8'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   365
    """ Execute thread without copy from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   366
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   367
    cu.executemany(statement, data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   368
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   369
def _execmany_thread_copy_from(cu, statement, data, table,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   370
                               columns, encoding='utf-8'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   371
    """ Execute thread with copy from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   372
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   373
    buf = _create_copyfrom_buffer(data, columns, encoding)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   374
    if buf is None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   375
        _execmany_thread_not_copy_from(cu, statement, data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   376
    else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   377
        if columns is None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   378
            cu.copy_from(buf, table, null='NULL')
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   379
        else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   380
            cu.copy_from(buf, table, null='NULL', columns=columns)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   381
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   382
def _execmany_thread(sql_connect, statements, dump_output_dir=None,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   383
                     support_copy_from=True, encoding='utf-8'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   384
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   385
    Execute sql statement. If 'INSERT INTO', try to use 'COPY FROM' command,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   386
    or fallback to execute_many.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   387
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   388
    if support_copy_from:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   389
        execmany_func = _execmany_thread_copy_from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   390
    else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   391
        execmany_func = _execmany_thread_not_copy_from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   392
    cnx = sql_connect()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   393
    cu = cnx.cursor()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   394
    try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   395
        for statement, data in statements:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   396
            table = None
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   397
            columns = None
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   398
            try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   399
                if not statement.startswith('INSERT INTO'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   400
                    cu.executemany(statement, data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   401
                    continue
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   402
                table = statement.split()[2]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   403
                if isinstance(data[0], (tuple, list)):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   404
                    columns = None
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   405
                else:
8696
0bb18407c053 [toward py3k] rewrite dict.keys() and dict.values() (part of #2711624)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 8695
diff changeset
   406
                    columns = list(data[0])
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   407
                execmany_func(cu, statement, data, table, columns, encoding)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   408
            except Exception:
8970
0a1bd0c590e2 [dataimport] minor typo in error handling
Dimitri Papadopoulos <dimitri.papadopoulos@cea.fr>
parents: 8930
diff changeset
   409
                print 'unable to copy data into table %s' % table
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   410
                # Error in import statement, save data in dump_output_dir
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   411
                if dump_output_dir is not None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   412
                    pdata = {'data': data, 'statement': statement,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   413
                             'time': asctime(), 'columns': columns}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   414
                    filename = make_uid()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   415
                    try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   416
                        with open(osp.join(dump_output_dir,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   417
                                           '%s.pickle' % filename), 'w') as fobj:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   418
                            fobj.write(cPickle.dumps(pdata))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   419
                    except IOError:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   420
                        print 'ERROR while pickling in', dump_output_dir, filename+'.pickle'
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   421
                        pass
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   422
                cnx.rollback()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   423
                raise
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   424
    finally:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   425
        cnx.commit()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   426
        cu.close()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   427
8631
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   428
def _create_copyfrom_buffer(data, columns, encoding='utf-8', replace_sep=None):
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   429
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   430
    Create a StringIO buffer for 'COPY FROM' command.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   431
    Deals with Unicode, Int, Float, Date...
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   432
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   433
    # Create a list rather than directly create a StringIO
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   434
    # to correctly write lines separated by '\n' in a single step
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   435
    rows = []
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   436
    if isinstance(data[0], (tuple, list)):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   437
        columns = range(len(data[0]))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   438
    for row in data:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   439
        # Iterate over the different columns and the different values
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   440
        # and try to convert them to a correct datatype.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   441
        # If an error is raised, do not continue.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   442
        formatted_row = []
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   443
        for col in columns:
8926
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   444
            try:
8834
6947201033be [dataimport] Handle various data formats when creating buffers from data.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8833
diff changeset
   445
                value = row[col]
8926
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   446
            except KeyError:
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   447
                warnings.warn(u"Column %s is not accessible in row %s" 
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   448
                              % (col, row), RuntimeWarning)
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   449
                # XXX 'value' set to None so that the import does not end in 
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   450
                # error. 
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   451
                # Instead, the extra keys are set to NULL from the 
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   452
                # database point of view.
336e4971dc50 [dataimport] backout 6947201033be (related to #2788402)
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8900
diff changeset
   453
                value = None
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   454
            if value is None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   455
                value = 'NULL'
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   456
            elif isinstance(value, (long, int, float)):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   457
                value = str(value)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   458
            elif isinstance(value, (str, unicode)):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   459
                # Remove separators used in string formatting
8631
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   460
                for _char in (u'\t', u'\r', u'\n'):
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   461
                    if _char in value:
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   462
                        # If a replace_sep is given, replace
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   463
                        # the separator instead of returning None
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   464
                        # (and thus avoid empty buffer)
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   465
                        if replace_sep:
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   466
                            value = value.replace(_char, replace_sep)
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   467
                        else:
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   468
                            return
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   469
                value = value.replace('\\', r'\\')
8631
1053b9d0fdf7 [dataimport] Allow to replace escape char in the create_copyfrom_buffer
Vincent Michel <vincent.michel@logilab.fr>
parents: 8625
diff changeset
   470
                if value is None:
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   471
                    return
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   472
                if isinstance(value, unicode):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   473
                    value = value.encode(encoding)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   474
            elif isinstance(value, (date, datetime)):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   475
                value = '%04d-%02d-%02d' % (value.year,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   476
                                            value.month,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   477
                                            value.day)
9696
4de6e73f580d [dataimport] Correctly serialize datetime objects in _create_copyfrom_buffer, closes #3712885
Vincent Michel <vincent.michel@logilab.fr>
parents: 9695
diff changeset
   478
                if isinstance(value, datetime):
4de6e73f580d [dataimport] Correctly serialize datetime objects in _create_copyfrom_buffer, closes #3712885
Vincent Michel <vincent.michel@logilab.fr>
parents: 9695
diff changeset
   479
                    value += ' %02d:%02d:%02d' % (value.hour,
4de6e73f580d [dataimport] Correctly serialize datetime objects in _create_copyfrom_buffer, closes #3712885
Vincent Michel <vincent.michel@logilab.fr>
parents: 9695
diff changeset
   480
                                                  value.minutes,
4de6e73f580d [dataimport] Correctly serialize datetime objects in _create_copyfrom_buffer, closes #3712885
Vincent Michel <vincent.michel@logilab.fr>
parents: 9695
diff changeset
   481
                                                  value.second)
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   482
            else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   483
                return None
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   484
            # We push the value to the new formatted row
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   485
            # if the value is not None and could be converted to a string.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   486
            formatted_row.append(value)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   487
        rows.append('\t'.join(formatted_row))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   488
    return StringIO('\n'.join(rows))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   489
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   490
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   491
# object stores #################################################################
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   492
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   493
class ObjectStore(object):
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   494
    """Store objects in memory for *faster* validation (development mode)
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   495
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   496
    But it will not enforce the constraints of the schema and hence will miss some problems
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   497
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   498
    >>> store = ObjectStore()
7158
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
   499
    >>> user = store.create_entity('CWUser', login=u'johndoe')
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
   500
    >>> group = store.create_entity('CWUser', name=u'unknown')
0f31a50b144e [dataimport] cleanups, update docstring to up-to-date usage
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7118
diff changeset
   501
    >>> store.relate(user.eid, 'in_group', group.eid)
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   502
    """
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   503
    def __init__(self):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   504
        self.items = []
3003
2944ee420dca R [dataimport] rename uid to eid
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 2974
diff changeset
   505
        self.eids = {}
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   506
        self.types = {}
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   507
        self.relations = set()
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   508
        self.indexes = {}
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   509
        self._rql = None
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   510
        self._commit = None
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   511
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   512
    def _put(self, type, item):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   513
        self.items.append(item)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   514
        return len(self.items) - 1
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   515
6990
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   516
    def create_entity(self, etype, **data):
7159
3bcccd3ab6b6 [dataimport] ObjectStore.create_entity should return something that looks like an entity (eg no more using dict protocol to access to attributes)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7158
diff changeset
   517
        data = attrdict(data)
3bcccd3ab6b6 [dataimport] ObjectStore.create_entity should return something that looks like an entity (eg no more using dict protocol to access to attributes)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7158
diff changeset
   518
        data['eid'] = eid = self._put(etype, data)
6990
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   519
        self.eids[eid] = data
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   520
        self.types.setdefault(etype, []).append(eid)
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   521
        return data
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   522
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   523
    @deprecated("[3.11] add is deprecated, use create_entity instead")
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   524
    def add(self, etype, item):
3486
ea6bf6f9ba0c [cwctl] improve dialog messages
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 3318
diff changeset
   525
        assert isinstance(item, dict), 'item is not a dict but a %s' % type(item)
6990
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   526
        data = self.create_entity(etype, **item)
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   527
        item['eid'] = data['eid']
353ad06867a8 [dataimport] implement create_entity() on ObjectStore to provide a consistent interface
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6989
diff changeset
   528
        return item
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   529
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   530
    def relate(self, eid_from, rtype, eid_to, **kwargs):
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   531
        """Add new relation"""
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   532
        relation = eid_from, rtype, eid_to
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   533
        self.relations.add(relation)
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   534
        return relation
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   535
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   536
    def commit(self):
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   537
        """this commit method do nothing by default
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   538
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   539
        This is voluntary to use the frequent autocommit feature in CubicWeb
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   540
        when you are using hooks or another
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   541
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   542
        If you want override commit method, please set it by the
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   543
        constructor
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   544
        """
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   545
        pass
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   546
8833
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   547
    def flush(self):
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   548
        """The method is provided so that all stores share a common API.
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   549
        It just tries to call the commit method.
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   550
        """
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   551
        print 'starting flush'
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   552
        try:
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   553
            self.commit()
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   554
        except:
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   555
            print 'failed to flush'
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   556
        else:
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   557
            print 'flush done'
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
   558
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   559
    def rql(self, *args):
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   560
        if self._rql is not None:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   561
            return self._rql(*args)
7033
ddc1b4d80dbd [dataimport] remove eid_key deprecation warning and prints
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6990
diff changeset
   562
        return []
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   563
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   564
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   565
    def nb_inserted_entities(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   566
        return len(self.eids)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   567
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   568
    def nb_inserted_types(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   569
        return len(self.types)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   570
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   571
    def nb_inserted_relations(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   572
        return len(self.relations)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   573
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   574
class RQLObjectStore(ObjectStore):
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   575
    """ObjectStore that works with an actual RQL repository (production mode)"""
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   576
    _rql = None # bw compat
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   577
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   578
    def __init__(self, session=None, commit=None):
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   579
        ObjectStore.__init__(self)
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   580
        if session is None:
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   581
            sys.exit('please provide a session of run this script with cubicweb-ctl shell and pass cnx as session')
7398
26695dd703d8 [repository api] definitly kill usage of word 'pool' to refer to connections set used by a session
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7227
diff changeset
   582
        if not hasattr(session, 'set_cnxset'):
8403
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   583
            if hasattr(session, 'request'):
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   584
                # connection object
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   585
                cnx = session
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   586
                session = session.request()
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   587
            else: # object is already a request
a6ee3cd783e1 [data import] allow a request to be given as argument, ease use from web ui
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7815
diff changeset
   588
                cnx = session.cnx
7398
26695dd703d8 [repository api] definitly kill usage of word 'pool' to refer to connections set used by a session
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7227
diff changeset
   589
            session.set_cnxset = lambda : None
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   590
            commit = commit or cnx.commit
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   591
        else:
7398
26695dd703d8 [repository api] definitly kill usage of word 'pool' to refer to connections set used by a session
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7227
diff changeset
   592
            session.set_cnxset()
6122
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   593
        self.session = session
4d2b04b32cdc improvements in dataimport.py
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 5557
diff changeset
   594
        self._commit = commit or session.commit
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   595
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   596
    def commit(self):
5063
2a94b61837e1 [dataimport] stop disabling undo ; commit return transaction id
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5054
diff changeset
   597
        txuuid = self._commit()
7398
26695dd703d8 [repository api] definitly kill usage of word 'pool' to refer to connections set used by a session
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7227
diff changeset
   598
        self.session.set_cnxset()
5063
2a94b61837e1 [dataimport] stop disabling undo ; commit return transaction id
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5054
diff changeset
   599
        return txuuid
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   600
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   601
    def rql(self, *args):
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   602
        if self._rql is not None:
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   603
            return self._rql(*args)
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   604
        return self.session.execute(*args)
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   605
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   606
    def create_entity(self, *args, **kwargs):
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   607
        entity = self.session.create_entity(*args, **kwargs)
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   608
        self.eids[entity.eid] = entity
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   609
        self.types.setdefault(args[0], []).append(entity.eid)
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   610
        return entity
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   611
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   612
    def _put(self, type, item):
6989
4a999a647f52 [dataimport] make it possible to insert 'empty' (i.e. no-attrs) entities
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6492
diff changeset
   613
        query = 'INSERT %s X' % type
4a999a647f52 [dataimport] make it possible to insert 'empty' (i.e. no-attrs) entities
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6492
diff changeset
   614
        if item:
4a999a647f52 [dataimport] make it possible to insert 'empty' (i.e. no-attrs) entities
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6492
diff changeset
   615
            query += ': ' + ', '.join('X %s %%(%s)s' % (k, k)
4a999a647f52 [dataimport] make it possible to insert 'empty' (i.e. no-attrs) entities
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6492
diff changeset
   616
                                      for k in item)
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   617
        return self.rql(query, item)[0][0]
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   618
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   619
    def relate(self, eid_from, rtype, eid_to, **kwargs):
4721
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   620
        eid_from, rtype, eid_to = super(RQLObjectStore, self).relate(
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   621
            eid_from, rtype, eid_to, **kwargs)
4136
47060a66c97f dataimport refactoring / improvments, keeping bw compat (for now)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 3486
diff changeset
   622
        self.rql('SET X %s Y WHERE X eid %%(x)s, Y eid %%(y)s' % rtype,
7033
ddc1b4d80dbd [dataimport] remove eid_key deprecation warning and prints
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 6990
diff changeset
   623
                 {'x': int(eid_from), 'y': int(eid_to)})
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   624
9750
566f8fce5168 [dataimport, migration] silence find_entities / find_one_entity warning
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9635
diff changeset
   625
    @deprecated("[3.19] use session.find(*args, **kwargs).entities() instead")
7116
dfd4680a23f0 [session] add find_entities and find_one_entity to session/request API (closes #1550045)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 7033
diff changeset
   626
    def find_entities(self, *args, **kwargs):
9750
566f8fce5168 [dataimport, migration] silence find_entities / find_one_entity warning
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9635
diff changeset
   627
        return self.session.find(*args, **kwargs).entities()
7116
dfd4680a23f0 [session] add find_entities and find_one_entity to session/request API (closes #1550045)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 7033
diff changeset
   628
9750
566f8fce5168 [dataimport, migration] silence find_entities / find_one_entity warning
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9635
diff changeset
   629
    @deprecated("[3.19] use session.find(*args, **kwargs).one() instead")
7116
dfd4680a23f0 [session] add find_entities and find_one_entity to session/request API (closes #1550045)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 7033
diff changeset
   630
    def find_one_entity(self, *args, **kwargs):
9750
566f8fce5168 [dataimport, migration] silence find_entities / find_one_entity warning
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9635
diff changeset
   631
        return self.session.find(*args, **kwargs).one()
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   632
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   633
# the import controller ########################################################
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   634
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   635
class CWImportController(object):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   636
    """Controller of the data import process.
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   637
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   638
    >>> ctl = CWImportController(store)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   639
    >>> ctl.generators = list_of_data_generators
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   640
    >>> ctl.data = dict_of_data_tables
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   641
    >>> ctl.run()
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   642
    """
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   643
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   644
    def __init__(self, store, askerror=0, catcherrors=None, tell=tell,
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   645
                 commitevery=50):
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   646
        self.store = store
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   647
        self.generators = None
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   648
        self.data = {}
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   649
        self.errors = None
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   650
        self.askerror = askerror
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   651
        if  catcherrors is None:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   652
            catcherrors = askerror
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   653
        self.catcherrors = catcherrors
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   654
        self.commitevery = commitevery # set to None to do a single commit
3029
bc573d5fb5b7 F [devtools] by default dataimport prints message on stdout
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 3003
diff changeset
   655
        self._tell = tell
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   656
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   657
    def check(self, type, key, value):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   658
        self._checks.setdefault(type, {}).setdefault(key, []).append(value)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   659
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   660
    def check_map(self, entity, key, map, default):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   661
        try:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   662
            entity[key] = map[entity[key]]
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   663
        except KeyError:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   664
            self.check(key, entity[key], None)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   665
            entity[key] = default
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   666
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   667
    def record_error(self, key, msg=None, type=None, value=None, tb=None):
4186
ca7e526b07b6 import cleanup, check data file exists
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4173
diff changeset
   668
        tmp = StringIO()
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   669
        if type is None:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   670
            traceback.print_exc(file=tmp)
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   671
        else:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   672
            traceback.print_exception(type, value, tb, file=tmp)
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   673
        # use a list to avoid counting a <nb lines> errors instead of one
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   674
        errorlog = self.errors.setdefault(key, [])
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   675
        if msg is None:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   676
            errorlog.append(tmp.getvalue().splitlines())
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   677
        else:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   678
            errorlog.append( (msg, tmp.getvalue().splitlines()) )
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   679
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   680
    def run(self):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   681
        self.errors = {}
7171
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   682
        if self.commitevery is None:
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   683
            self.tell('Will commit all or nothing.')
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   684
        else:
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   685
            self.tell('Will commit every %s iterations' % self.commitevery)
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   686
        for func, checks in self.generators:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   687
            self._checks = {}
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   688
            func_name = func.__name__
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   689
            self.tell("Run import function '%s'..." % func_name)
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   690
            try:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   691
                func(self)
7815
2a164a9cf81c [exceptions] stop catching any exception in various places (closes #1942716)
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7471
diff changeset
   692
            except Exception:
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   693
                if self.catcherrors:
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   694
                    self.record_error(func_name, 'While calling %s' % func.__name__)
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   695
                else:
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   696
                    self._print_stats()
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   697
                    raise
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   698
            for key, func, title, help in checks:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   699
                buckets = self._checks.get(key)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   700
                if buckets:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   701
                    err = func(buckets)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   702
                    if err:
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   703
                        self.errors[title] = (help, err)
7171
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   704
        try:
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   705
            txuuid = self.store.commit()
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   706
            if txuuid is not None:
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   707
                self.tell('Transaction commited (txuuid: %s)' % txuuid)
8695
358d8bed9626 [toward-py3k] rewrite to "except AnException as exc:" (part of #2711624)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 8637
diff changeset
   708
        except QueryError as ex:
7171
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   709
            self.tell('Transaction aborted: %s' % ex)
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   710
        self._print_stats()
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   711
        if self.errors:
4721
8f63691ccb7f pylint style fixes
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4613
diff changeset
   712
            if self.askerror == 2 or (self.askerror and confirm('Display errors ?')):
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   713
                from pprint import pformat
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   714
                for errkey, error in self.errors.items():
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   715
                    self.tell("\n%s (%s): %d\n" % (error[0], errkey, len(error[1])))
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   716
                    self.tell(pformat(sorted(error[1])))
7171
4297be67bbe4 [dataimport] tell more and nicely about transaction status
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 7170
diff changeset
   717
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   718
    def _print_stats(self):
8696
0bb18407c053 [toward py3k] rewrite dict.keys() and dict.values() (part of #2711624)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 8695
diff changeset
   719
        nberrors = sum(len(err) for err in self.errors.itervalues())
4912
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   720
        self.tell('\nImport statistics: %i entities, %i types, %i relations and %i errors'
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   721
                  % (self.store.nb_inserted_entities,
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   722
                     self.store.nb_inserted_types,
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   723
                     self.store.nb_inserted_relations,
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   724
                     nberrors))
9767cc516b4f [R] dataimport: changes
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4847
diff changeset
   725
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   726
    def get_data(self, key):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   727
        return self.data.get(key)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   728
4527
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   729
    def index(self, name, key, value, unique=False):
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   730
        """create a new index
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   731
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   732
        If unique is set to True, only first occurence will be kept not the following ones
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   733
        """
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   734
        if unique:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   735
            try:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   736
                if value in self.store.indexes[name][key]:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   737
                    return
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   738
            except KeyError:
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   739
                # we're sure that one is the first occurence; so continue...
67ab70e98488 [R] devtools: improve default data import mechanism
Julien Jehannet <julien.jehannet@logilab.fr>
parents: 4252
diff changeset
   740
                pass
2974
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   741
        self.store.indexes.setdefault(name, {}).setdefault(key, []).append(value)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   742
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   743
    def tell(self, msg):
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   744
        self._tell(msg)
3dfe497e5afa F tools to import data
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents:
diff changeset
   745
4152
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   746
    def iter_and_commit(self, datakey):
30fd1229137d new catch_error context manager, nicer controller __init__ and new iter_and_commit(datakey) method
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4140
diff changeset
   747
        """iter rows, triggering commit every self.commitevery iterations"""
6136
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   748
        if self.commitevery is None:
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   749
            return self.get_data(datakey)
79da6f969b15 [dataimport] refactor commitevery to gain readability
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 6133
diff changeset
   750
        else:
6169
55378e1bab1b fix order of parameters in call to callfunc_every
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6136
diff changeset
   751
            return callfunc_every(self.store.commit,
55378e1bab1b fix order of parameters in call to callfunc_every
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6136
diff changeset
   752
                                  self.commitevery,
55378e1bab1b fix order of parameters in call to callfunc_every
Alexandre Fayolle <alexandre.fayolle@logilab.fr>
parents: 6136
diff changeset
   753
                                  self.get_data(datakey))
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   754
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   755
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   756
class NoHookRQLObjectStore(RQLObjectStore):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   757
    """ObjectStore that works with an actual RQL repository (production mode)"""
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   758
    _rql = None # bw compat
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   759
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   760
    def __init__(self, session, metagen=None, baseurl=None):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   761
        super(NoHookRQLObjectStore, self).__init__(session)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   762
        self.source = session.repo.system_source
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   763
        self.rschema = session.repo.schema.rschema
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   764
        self.add_relation = self.source.add_relation
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   765
        if metagen is None:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   766
            metagen = MetaGenerator(session, baseurl)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   767
        self.metagen = metagen
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   768
        self._nb_inserted_entities = 0
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   769
        self._nb_inserted_types = 0
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   770
        self._nb_inserted_relations = 0
5054
cb066d29166a fix dataimport for 3.7.2
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4913
diff changeset
   771
        self.rql = session.execute
cb066d29166a fix dataimport for 3.7.2
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4913
diff changeset
   772
        # deactivate security
8807
d9aaad2c52e9 [session] drop useless getter and setter for security
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8797
diff changeset
   773
        session.read_security = False
d9aaad2c52e9 [session] drop useless getter and setter for security
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8797
diff changeset
   774
        session.write_security = False
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   775
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   776
    def create_entity(self, etype, **kwargs):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   777
        for k, v in kwargs.iteritems():
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   778
            kwargs[k] = getattr(v, 'eid', v)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   779
        entity, rels = self.metagen.base_etype_dicts(etype)
7471
bf9443f8725f [dataimport] fix #1732685: cached entity and shared cw_edited data with NoHookRQLObjectStore
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 7398
diff changeset
   780
        # make a copy to keep cached entity pristine
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   781
        entity = copy(entity)
7471
bf9443f8725f [dataimport] fix #1732685: cached entity and shared cw_edited data with NoHookRQLObjectStore
Adrien Di Mascio <Adrien.DiMascio@logilab.fr>
parents: 7398
diff changeset
   782
        entity.cw_edited = copy(entity.cw_edited)
5557
1a534c596bff [entity] continue cleanup of Entity/AnyEntity namespace
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 5424
diff changeset
   783
        entity.cw_clear_relation_cache()
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   784
        self.metagen.init_entity(entity)
6142
8bc6eac1fac1 [session] cleanup hook / operation / entity edition api
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6122
diff changeset
   785
        entity.cw_edited.update(kwargs, skipsec=False)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   786
        session = self.session
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   787
        self.source.add_entity(session, entity)
5054
cb066d29166a fix dataimport for 3.7.2
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4913
diff changeset
   788
        self.source.add_info(session, entity, self.source, None, complete=False)
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   789
        kwargs = dict()
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   790
        if inspect.getargspec(self.add_relation).keywords:
8900
010a59e12d89 use cw_etype instead of __regid__
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8835
diff changeset
   791
            kwargs['subjtype'] = entity.cw_etype
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   792
        for rtype, targeteids in rels.iteritems():
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   793
            # targeteids may be a single eid or a list of eids
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   794
            inlined = self.rschema(rtype).inlined
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   795
            try:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   796
                for targeteid in targeteids:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   797
                    self.add_relation(session, entity.eid, rtype, targeteid,
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   798
                                      inlined, **kwargs)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   799
            except TypeError:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   800
                self.add_relation(session, entity.eid, rtype, targeteids,
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   801
                                  inlined, **kwargs)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   802
        self._nb_inserted_entities += 1
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   803
        return entity
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   804
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   805
    def relate(self, eid_from, rtype, eid_to, **kwargs):
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   806
        assert not rtype.startswith('reverse_')
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   807
        self.add_relation(self.session, eid_from, rtype, eid_to,
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   808
                          self.rschema(rtype).inlined)
9597
8e9db17ce129 [dataimport] Correctly call rschema(rtype) in SqlGenObjectStore, closes #3694139
Vincent Michel <vincent.michel@logilab.fr>
parents: 9536
diff changeset
   809
        if self.rschema(rtype).symmetric:
9361
0542a85fe667 symmetric relations: replace bogus rql2sql translation by a hook
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9181
diff changeset
   810
            self.add_relation(self.session, eid_to, rtype, eid_from,
0542a85fe667 symmetric relations: replace bogus rql2sql translation by a hook
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9181
diff changeset
   811
                              self.rschema(rtype).inlined)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   812
        self._nb_inserted_relations += 1
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   813
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   814
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   815
    def nb_inserted_entities(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   816
        return self._nb_inserted_entities
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   817
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   818
    def nb_inserted_types(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   819
        return self._nb_inserted_types
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   820
    @property
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   821
    def nb_inserted_relations(self):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   822
        return self._nb_inserted_relations
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   823
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   824
    def _put(self, type, item):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   825
        raise RuntimeError('use create entity')
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   826
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   827
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   828
class MetaGenerator(object):
6427
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   829
    META_RELATIONS = (META_RTYPES
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   830
                      - VIRTUAL_RTYPES
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   831
                      - set(('eid', 'cwuri',
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   832
                             'is', 'is_instance_of', 'cw_source')))
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   833
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   834
    def __init__(self, session, baseurl=None):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   835
        self.session = session
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   836
        self.source = session.repo.system_source
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   837
        self.time = datetime.now()
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   838
        if baseurl is None:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   839
            config = session.vreg.config
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   840
            baseurl = config['base-url'] or config.default_base_url()
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   841
        if not baseurl[-1] == '/':
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   842
            baseurl += '/'
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   843
        self.baseurl =  baseurl
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   844
        # attributes/relations shared by all entities of the same type
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   845
        self.etype_attrs = []
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   846
        self.etype_rels = []
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   847
        # attributes/relations specific to each entity
5054
cb066d29166a fix dataimport for 3.7.2
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4913
diff changeset
   848
        self.entity_attrs = ['cwuri']
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   849
        #self.entity_rels = [] XXX not handled (YAGNI?)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   850
        schema = session.vreg.schema
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   851
        rschema = schema.rschema
6427
c8a5ac2d1eaa [schema / sources] store data sources as cubicweb entities
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6173
diff changeset
   852
        for rtype in self.META_RELATIONS:
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   853
            if rschema(rtype).final:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   854
                self.etype_attrs.append(rtype)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   855
            else:
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   856
                self.etype_rels.append(rtype)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   857
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   858
    @cached
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   859
    def base_etype_dicts(self, etype):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   860
        entity = self.session.vreg['etypes'].etype_class(etype)(self.session)
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   861
        # entity are "surface" copied, avoid shared dict between copies
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   862
        del entity.cw_extra_kwargs
6142
8bc6eac1fac1 [session] cleanup hook / operation / entity edition api
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 6122
diff changeset
   863
        entity.cw_edited = EditedEntity(entity)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   864
        for attr in self.etype_attrs:
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   865
            genfunc = self.generate(attr)
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   866
            if genfunc:
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   867
                entity.cw_edited.edited_attribute(attr, genfunc(entity))
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   868
        rels = {}
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   869
        for rel in self.etype_rels:
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   870
            genfunc = self.generate(rel)
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   871
            if genfunc:
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   872
                rels[rel] = genfunc(entity)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   873
        return entity, rels
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   874
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   875
    def init_entity(self, entity):
5054
cb066d29166a fix dataimport for 3.7.2
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4913
diff changeset
   876
        entity.eid = self.source.create_eid(self.session)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   877
        for attr in self.entity_attrs:
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   878
            genfunc = self.generate(attr)
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   879
            if genfunc:
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   880
                entity.cw_edited.edited_attribute(attr, genfunc(entity))
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   881
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   882
    def generate(self, rtype):
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   883
        return getattr(self, 'gen_%s' % rtype, None)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   884
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   885
    def gen_cwuri(self, entity):
9515
b0dd5b57d2d8 [dataimport, migration] more fixes in the spirit of a6c32edabc8d:
Dimitri Papadopoulos <dimitri.papadopoulos@cea.fr>
parents: 9440
diff changeset
   886
        return u'%s%s' % (self.baseurl, entity.eid)
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   887
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   888
    def gen_creation_date(self, entity):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   889
        return self.time
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   890
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   891
    def gen_modification_date(self, entity):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   892
        return self.time
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   893
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   894
    def gen_created_by(self, entity):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   895
        return self.session.user.eid
9697
d96b5e72717c [dataimport] Add safety belt on "gen_rtype" in MetaGenerator, closes #3712892
Vincent Michel <vincent.michel@logilab.fr>
parents: 9696
diff changeset
   896
4818
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   897
    def gen_owned_by(self, entity):
9f9bfbcdecfd le patch massiveimport a été importé
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 4734
diff changeset
   898
        return self.session.user.eid
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   899
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   900
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   901
###########################################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   902
## SQL object store #######################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   903
###########################################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   904
class SQLGenObjectStore(NoHookRQLObjectStore):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   905
    """Controller of the data import process. This version is based
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   906
    on direct insertions throught SQL command (COPY FROM or execute many).
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   907
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   908
    >>> store = SQLGenObjectStore(session)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   909
    >>> store.create_entity('Person', ...)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   910
    >>> store.flush()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   911
    """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   912
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   913
    def __init__(self, session, dump_output_dir=None, nb_threads_statement=3):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   914
        """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   915
        Initialize a SQLGenObjectStore.
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   916
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   917
        Parameters:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   918
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   919
          - session: session on the cubicweb instance
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   920
          - dump_output_dir: a directory to dump failed statements
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   921
            for easier recovery. Default is None (no dump).
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   922
          - nb_threads_statement: number of threads used
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   923
            for SQL insertion (default is 3).
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   924
        """
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   925
        super(SQLGenObjectStore, self).__init__(session)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   926
        ### hijack default source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   927
        self.source = SQLGenSourceWrapper(
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   928
            self.source, session.vreg.schema,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   929
            dump_output_dir=dump_output_dir,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   930
            nb_threads_statement=nb_threads_statement)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   931
        ### XXX This is done in super().__init__(), but should be
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   932
        ### redone here to link to the correct source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   933
        self.add_relation = self.source.add_relation
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   934
        self.indexes_etypes = {}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   935
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   936
    def flush(self):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   937
        """Flush data to the database"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   938
        self.source.flush()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   939
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   940
    def relate(self, subj_eid, rtype, obj_eid, **kwargs):
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   941
        if subj_eid is None or obj_eid is None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   942
            return
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   943
        # XXX Could subjtype be inferred ?
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   944
        self.source.add_relation(self.session, subj_eid, rtype, obj_eid,
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
   945
                                 self.rschema(rtype).inlined, **kwargs)
9597
8e9db17ce129 [dataimport] Correctly call rschema(rtype) in SqlGenObjectStore, closes #3694139
Vincent Michel <vincent.michel@logilab.fr>
parents: 9536
diff changeset
   946
        if self.rschema(rtype).symmetric:
9361
0542a85fe667 symmetric relations: replace bogus rql2sql translation by a hook
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9181
diff changeset
   947
            self.source.add_relation(self.session, obj_eid, rtype, subj_eid,
0542a85fe667 symmetric relations: replace bogus rql2sql translation by a hook
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9181
diff changeset
   948
                                     self.rschema(rtype).inlined, **kwargs)
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   949
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   950
    def drop_indexes(self, etype):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   951
        """Drop indexes for a given entity type"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   952
        if etype not in self.indexes_etypes:
9463
d62e13eba033 [multi-sources-removal] Simplify ConnectionsSet internal structures and public methods
Sylvain Thénault <sylvain.thenault@logilab.fr>
parents: 9450
diff changeset
   953
            cu = self.session.cnxset.cu
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   954
            def index_to_attr(index):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   955
                """turn an index name to (database) attribute name"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   956
                return index.replace(etype.lower(), '').replace('idx', '').strip('_')
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   957
            indices = [(index, index_to_attr(index))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   958
                       for index in self.source.dbhelper.list_indices(cu, etype)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   959
                       # Do not consider 'cw_etype_pkey' index
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   960
                       if not index.endswith('key')]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   961
            self.indexes_etypes[etype] = indices
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   962
        for index, attr in self.indexes_etypes[etype]:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   963
            self.session.system_sql('DROP INDEX %s' % index)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   964
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   965
    def create_indexes(self, etype):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   966
        """Recreate indexes for a given entity type"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   967
        for index, attr in self.indexes_etypes.get(etype, []):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   968
            sql = 'CREATE INDEX %s ON cw_%s(%s)' % (index, etype, attr)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   969
            self.session.system_sql(sql)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   970
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   971
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   972
###########################################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   973
## SQL Source #############################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   974
###########################################################################
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   975
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   976
class SQLGenSourceWrapper(object):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   977
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   978
    def __init__(self, system_source, schema,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   979
                 dump_output_dir=None, nb_threads_statement=3):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   980
        self.system_source = system_source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   981
        self._sql = threading.local()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   982
        # Explicitely backport attributes from system source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   983
        self._storage_handler = self.system_source._storage_handler
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   984
        self.preprocess_entity = self.system_source.preprocess_entity
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   985
        self.sqlgen = self.system_source.sqlgen
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   986
        self.uri = self.system_source.uri
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   987
        self.eid = self.system_source.eid
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   988
        # Directory to write temporary files
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   989
        self.dump_output_dir = dump_output_dir
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   990
        # Allow to execute code with SQLite backend that does
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   991
        # not support (yet...) copy_from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   992
        # XXX Should be dealt with in logilab.database
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   993
        spcfrom = system_source.dbhelper.dbapi_module.support_copy_from
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   994
        self.support_copy_from = spcfrom
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   995
        self.dbencoding = system_source.dbhelper.dbencoding
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   996
        self.nb_threads_statement = nb_threads_statement
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   997
        # initialize thread-local data for main thread
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   998
        self.init_thread_locals()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
   999
        self._inlined_rtypes_cache = {}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1000
        self._fill_inlined_rtypes_cache(schema)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1001
        self.schema = schema
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1002
        self.do_fti = False
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1003
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1004
    def _fill_inlined_rtypes_cache(self, schema):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1005
        cache = self._inlined_rtypes_cache
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1006
        for eschema in schema.entities():
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1007
            for rschema in eschema.ordered_relations():
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1008
                if rschema.inlined:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1009
                    cache[eschema.type] = SQL_PREFIX + rschema.type
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1010
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1011
    def init_thread_locals(self):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1012
        """initializes thread-local data"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1013
        self._sql.entities = defaultdict(list)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1014
        self._sql.relations = {}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1015
        self._sql.inlined_relations = {}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1016
        # keep track, for each eid of the corresponding data dict
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1017
        self._sql.eid_insertdicts = {}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1018
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1019
    def flush(self):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1020
        print 'starting flush'
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1021
        _entities_sql = self._sql.entities
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1022
        _relations_sql = self._sql.relations
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1023
        _inlined_relations_sql = self._sql.inlined_relations
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1024
        _insertdicts = self._sql.eid_insertdicts
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1025
        try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1026
            # try, for each inlined_relation, to find if we're also creating
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1027
            # the host entity (i.e. the subject of the relation).
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1028
            # In that case, simply update the insert dict and remove
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1029
            # the need to make the
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1030
            # UPDATE statement
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1031
            for statement, datalist in _inlined_relations_sql.iteritems():
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1032
                new_datalist = []
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1033
                # for a given inlined relation,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1034
                # browse each couple to be inserted
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1035
                for data in datalist:
8696
0bb18407c053 [toward py3k] rewrite dict.keys() and dict.values() (part of #2711624)
Nicolas Chauvat <nicolas.chauvat@logilab.fr>
parents: 8695
diff changeset
  1036
                    keys = list(data)
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1037
                    # For inlined relations, it exists only two case:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1038
                    # (rtype, cw_eid) or (cw_eid, rtype)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1039
                    if keys[0] == 'cw_eid':
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1040
                        rtype = keys[1]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1041
                    else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1042
                        rtype = keys[0]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1043
                    updated_eid = data['cw_eid']
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1044
                    if updated_eid in _insertdicts:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1045
                        _insertdicts[updated_eid][rtype] = data[rtype]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1046
                    else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1047
                        # could not find corresponding insert dict, keep the
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1048
                        # UPDATE query
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1049
                        new_datalist.append(data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1050
                _inlined_relations_sql[statement] = new_datalist
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1051
            _import_statements(self.system_source.get_connection,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1052
                               _entities_sql.items()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1053
                               + _relations_sql.items()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1054
                               + _inlined_relations_sql.items(),
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1055
                               dump_output_dir=self.dump_output_dir,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1056
                               nb_threads=self.nb_threads_statement,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1057
                               support_copy_from=self.support_copy_from,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1058
                               encoding=self.dbencoding)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1059
        except:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1060
            print 'failed to flush'
8833
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
  1061
        else:
39f81e2db2fc [dataimport] Add a ``flush`` method for all stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8832
diff changeset
  1062
            print 'flush done'
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1063
        finally:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1064
            _entities_sql.clear()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1065
            _relations_sql.clear()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1066
            _insertdicts.clear()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1067
            _inlined_relations_sql.clear()
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1068
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1069
    def add_relation(self, session, subject, rtype, object,
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
  1070
                     inlined=False, **kwargs):
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1071
        if inlined:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1072
            _sql = self._sql.inlined_relations
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1073
            data = {'cw_eid': subject, SQL_PREFIX + rtype: object}
8832
26cdfc6dd6f8 [dataimport] Uniformize the API across the different stores.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8807
diff changeset
  1074
            subjtype = kwargs.get('subjtype')
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1075
            if subjtype is None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1076
                # Try to infer it
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1077
                targets = [t.type for t in
9425
d7e8293fa4de [dataimport] The subjtype should be the subject of a relation, not the object, closes #3365113
Vincent Michel <vincent.michel@logilab.fr>
parents: 9181
diff changeset
  1078
                           self.schema.rschema(rtype).subjects()]
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1079
                if len(targets) == 1:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1080
                    subjtype = targets[0]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1081
                else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1082
                    raise ValueError('You should give the subject etype for '
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1083
                                     'inlined relation %s'
8835
3612b760488b [dataimport] Slight message modification in exception handling code.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8834
diff changeset
  1084
                                     ', as it cannot be inferred: '
3612b760488b [dataimport] Slight message modification in exception handling code.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8834
diff changeset
  1085
                                     'this type is given as keyword argument '
3612b760488b [dataimport] Slight message modification in exception handling code.
Vladimir Popescu <vladimir.popescu@logilab.fr>
parents: 8834
diff changeset
  1086
                                     '``subjtype``'% rtype)
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1087
            statement = self.sqlgen.update(SQL_PREFIX + subjtype,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1088
                                           data, ['cw_eid'])
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1089
        else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1090
            _sql = self._sql.relations
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1091
            data = {'eid_from': subject, 'eid_to': object}
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1092
            statement = self.sqlgen.insert('%s_relation' % rtype, data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1093
        if statement in _sql:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1094
            _sql[statement].append(data)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1095
        else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1096
            _sql[statement] = [data]
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1097
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1098
    def add_entity(self, session, entity):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1099
        with self._storage_handler(entity, 'added'):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1100
            attrs = self.preprocess_entity(entity)
8900
010a59e12d89 use cw_etype instead of __regid__
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8835
diff changeset
  1101
            rtypes = self._inlined_rtypes_cache.get(entity.cw_etype, ())
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1102
            if isinstance(rtypes, str):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1103
                rtypes = (rtypes,)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1104
            for rtype in rtypes:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1105
                if rtype not in attrs:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1106
                    attrs[rtype] = None
8900
010a59e12d89 use cw_etype instead of __regid__
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8835
diff changeset
  1107
            sql = self.sqlgen.insert(SQL_PREFIX + entity.cw_etype, attrs)
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1108
            self._sql.eid_insertdicts[entity.eid] = attrs
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1109
            self._append_to_entities(sql, attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1110
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1111
    def _append_to_entities(self, sql, attrs):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1112
        self._sql.entities[sql].append(attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1113
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1114
    def _handle_insert_entity_sql(self, session, sql, attrs):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1115
        # We have to overwrite the source given in parameters
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1116
        # as here, we directly use the system source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1117
        attrs['asource'] = self.system_source.uri
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1118
        self._append_to_entities(sql, attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1119
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1120
    def _handle_is_relation_sql(self, session, sql, attrs):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1121
        self._append_to_entities(sql, attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1122
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1123
    def _handle_is_instance_of_sql(self, session, sql, attrs):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1124
        self._append_to_entities(sql, attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1125
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1126
    def _handle_source_relation_sql(self, session, sql, attrs):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1127
        self._append_to_entities(sql, attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1128
9522
8154a5748194 [dataimport] fix comment
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9425
diff changeset
  1129
    # add_info is _copypasted_ from the one in NativeSQLSource. We want it
8154a5748194 [dataimport] fix comment
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9425
diff changeset
  1130
    # there because it will use the _handlers of the SQLGenSourceWrapper, which
8154a5748194 [dataimport] fix comment
Aurelien Campeas <aurelien.campeas@logilab.fr>
parents: 9425
diff changeset
  1131
    # are not like the ones in the native source.
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1132
    def add_info(self, session, entity, source, extid, complete):
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1133
        """add type and source info for an eid into the system table"""
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1134
        # begin by inserting eid/type/source/extid into the entities table
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1135
        if extid is not None:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1136
            assert isinstance(extid, str)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1137
            extid = b64encode(extid)
8900
010a59e12d89 use cw_etype instead of __regid__
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8835
diff changeset
  1138
        attrs = {'type': entity.cw_etype, 'eid': entity.eid, 'extid': extid,
9827
c7ce035aede8 [dataimport] Drop reference to the 'source' column (closes #4067694).
Damien Garaud <damien.garaud@logilab.fr>
parents: 9770
diff changeset
  1139
                 'asource': source.uri}
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1140
        self._handle_insert_entity_sql(session, self.sqlgen.insert('entities', attrs), attrs)
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1141
        # insert core relations: is, is_instance_of and cw_source
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1142
        try:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1143
            self._handle_is_relation_sql(session, 'INSERT INTO is_relation(eid_from,eid_to) VALUES (%s,%s)',
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1144
                                         (entity.eid, eschema_eid(session, entity.e_schema)))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1145
        except IndexError:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1146
            # during schema serialization, skip
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1147
            pass
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1148
        else:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1149
            for eschema in entity.e_schema.ancestors() + [entity.e_schema]:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1150
                self._handle_is_relation_sql(session,
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1151
                                             'INSERT INTO is_instance_of_relation(eid_from,eid_to) VALUES (%s,%s)',
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1152
                                             (entity.eid, eschema_eid(session, eschema)))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1153
        if 'CWSource' in self.schema and source.eid is not None: # else, cw < 3.10
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1154
            self._handle_is_relation_sql(session, 'INSERT INTO cw_source_relation(eid_from,eid_to) VALUES (%s,%s)',
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1155
                                         (entity.eid, source.eid))
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1156
        # now we can update the full text index
8900
010a59e12d89 use cw_etype instead of __regid__
Pierre-Yves David <pierre-yves.david@logilab.fr>
parents: 8835
diff changeset
  1157
        if self.do_fti and self.need_fti_indexation(entity.cw_etype):
8625
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1158
            if complete:
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1159
                entity.complete(entity.e_schema.indexable_attributes())
7ee0752178e5 [dataimport] Add SQL Store for faster import - works ONLY with Postgres for now, as it requires "copy from" command - closes #2410822
Vincent Michel <vincent.michel@logilab.fr>
parents: 8406
diff changeset
  1160
            self.index_entity(session, entity=entity)